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Accurate segmentation of kidneys and kidney tumors is an essential step for radiomic analysis as well as developing advanced surgical planning techniques. In clinical analysis, the segmentation is currently performed by clinicians from the…

Image and Video Processing · Electrical Eng. & Systems 2020-06-05 Wenshuai Zhao , Dihong Jiang , Jorge Peña Queralta , Tomi Westerlund

Accurate segmentation is crucial for clinical applications, but existing models often assume fixed, high-resolution inputs and degrade significantly when faced with lower-resolution data in real-world scenarios. To address this limitation,…

Image and Video Processing · Electrical Eng. & Systems 2025-07-22 Simon Winther Albertsen , Hjalte Svaneborg Bjørnstrup , Mostafa Mehdipour Ghazi

The anatomical structure segmentation of the spine and adjacent structures from computed tomography (CT) images is a key step for spinal disease diagnosis and treatment. However, the segmentation of CT images is impeded by low contrast and…

Computer Vision and Pattern Recognition · Computer Science 2025-11-04 Jiaming Liu , Dingwei Fan , Junyong Zhao , Chunlin Li , Haipeng Si , Liang Sun

Magnetic resonance (MR)-guided radiation therapy (RT) is enhancing head and neck cancer (HNC) treatment through superior soft tissue contrast and longitudinal imaging capabilities. However, manual tumor segmentation remains a significant…

Glioma is the most common and aggressive brain tumor. Magnetic resonance imaging (MRI) plays a vital role to evaluate tumors for the arrangement of tumor surgery and the treatment of subsequent procedures. However, the manual segmentation…

Image and Video Processing · Electrical Eng. & Systems 2022-03-23 Wenbo Zhang , Guang Yang , He Huang , Weiji Yang , Xiaomei Xu , Yongkai Liu , Xiaobo Lai

Radiologists often mix medical image reading strategies, including inspection of individual modalities and local image regions, using information at different locations from different images independently as well as concurrently. In this…

Computer Vision and Pattern Recognition · Computer Science 2026-01-09 Xiangcen Wu , Shaheer U. Saeed , Yipei Wang , Ester Bonmati Coll , Yipeng Hu

Segmentation of COVID-19 lesions from chest CT scans is of great importance for better diagnosing the disease and investigating its extent. However, manual segmentation can be very time consuming and subjective, given the lesions' large…

Image and Video Processing · Electrical Eng. & Systems 2021-01-14 Simone Bendazzoli , Irene Brusini , Mehdi Astaraki , Mats Persson , Jimmy Yu , Bryan Connolly , Sven Nyrén , Fredrik Strand , Örjan Smedby , Chunliang Wang

Multimodal MRI provides critical complementary information for accurate brain tumor segmentation. However, conventional methods struggle when certain modalities are missing due to issues such as image quality, protocol inconsistencies,…

Computer Vision and Pattern Recognition · Computer Science 2025-07-03 Runze Cheng , Xihang Qiu , Ming Li , Ye Zhang , Chun Li , Fei Yu

Magnetic resonance imaging (MRI) is a central modality for stroke imaging. It is used upon patient admission to make treatment decisions such as selecting patients for intravenous thrombolysis or endovascular therapy. MRI is later used in…

Medical image segmentation is an increasingly popular area of research in medical imaging processing and analysis. However, many researchers who are new to the field struggle with basic concepts. This tutorial paper aims to provide an…

Image and Video Processing · Electrical Eng. & Systems 2023-04-13 Diedre Carmo , Gustavo Pinheiro , Lívia Rodrigues , Thays Abreu , Roberto Lotufo , Letícia Rittner

Automation of brain tumor segmentation in 3D magnetic resonance images (MRIs) is key to assess the diagnostic and treatment of the disease. In recent years, convolutional neural networks (CNNs) have shown improved results in the task.…

Image and Video Processing · Electrical Eng. & Systems 2021-01-01 Laura Mora Ballestar , Veronica Vilaplana

In this work, we report the set-up and results of the Liver Tumor Segmentation Benchmark (LiTS), which was organized in conjunction with the IEEE International Symposium on Biomedical Imaging (ISBI) 2017 and the International Conferences on…

Computer Vision and Pattern Recognition · Computer Science 2022-11-28 Patrick Bilic , Patrick Christ , Hongwei Bran Li , Eugene Vorontsov , Avi Ben-Cohen , Georgios Kaissis , Adi Szeskin , Colin Jacobs , Gabriel Efrain Humpire Mamani , Gabriel Chartrand , Fabian Lohöfer , Julian Walter Holch , Wieland Sommer , Felix Hofmann , Alexandre Hostettler , Naama Lev-Cohain , Michal Drozdzal , Michal Marianne Amitai , Refael Vivantik , Jacob Sosna , Ivan Ezhov , Anjany Sekuboyina , Fernando Navarro , Florian Kofler , Johannes C. Paetzold , Suprosanna Shit , Xiaobin Hu , Jana Lipková , Markus Rempfler , Marie Piraud , Jan Kirschke , Benedikt Wiestler , Zhiheng Zhang , Christian Hülsemeyer , Marcel Beetz , Florian Ettlinger , Michela Antonelli , Woong Bae , Míriam Bellver , Lei Bi , Hao Chen , Grzegorz Chlebus , Erik B. Dam , Qi Dou , Chi-Wing Fu , Bogdan Georgescu , Xavier Giró-i-Nieto , Felix Gruen , Xu Han , Pheng-Ann Heng , Jürgen Hesser , Jan Hendrik Moltz , Christian Igel , Fabian Isensee , Paul Jäger , Fucang Jia , Krishna Chaitanya Kaluva , Mahendra Khened , Ildoo Kim , Jae-Hun Kim , Sungwoong Kim , Simon Kohl , Tomasz Konopczynski , Avinash Kori , Ganapathy Krishnamurthi , Fan Li , Hongchao Li , Junbo Li , Xiaomeng Li , John Lowengrub , Jun Ma , Klaus Maier-Hein , Kevis-Kokitsi Maninis , Hans Meine , Dorit Merhof , Akshay Pai , Mathias Perslev , Jens Petersen , Jordi Pont-Tuset , Jin Qi , Xiaojuan Qi , Oliver Rippel , Karsten Roth , Ignacio Sarasua , Andrea Schenk , Zengming Shen , Jordi Torres , Christian Wachinger , Chunliang Wang , Leon Weninger , Jianrong Wu , Daguang Xu , Xiaoping Yang , Simon Chun-Ho Yu , Yading Yuan , Miao Yu , Liping Zhang , Jorge Cardoso , Spyridon Bakas , Rickmer Braren , Volker Heinemann , Christopher Pal , An Tang , Samuel Kadoury , Luc Soler , Bram van Ginneken , Hayit Greenspan , Leo Joskowicz , Bjoern Menze

The translation of AI-generated brain metastases (BM) segmentation into clinical practice relies heavily on diverse, high-quality annotated medical imaging datasets. The BraTS-METS 2023 challenge has gained momentum for testing and…

Other Quantitative Biology · Quantitative Biology 2024-12-10 Ahmed W. Moawad , Anastasia Janas , Ujjwal Baid , Divya Ramakrishnan , Rachit Saluja , Nader Ashraf , Nazanin Maleki , Leon Jekel , Nikolay Yordanov , Pascal Fehringer , Athanasios Gkampenis , Raisa Amiruddin , Amirreza Manteghinejad , Maruf Adewole , Jake Albrecht , Udunna Anazodo , Sanjay Aneja , Syed Muhammad Anwar , Timothy Bergquist , Veronica Chiang , Verena Chung , Gian Marco Conte , Farouk Dako , James Eddy , Ivan Ezhov , Nastaran Khalili , Keyvan Farahani , Juan Eugenio Iglesias , Zhifan Jiang , Elaine Johanson , Anahita Fathi Kazerooni , Florian Kofler , Kiril Krantchev , Dominic LaBella , Koen Van Leemput , Hongwei Bran Li , Marius George Linguraru , Xinyang Liu , Zeke Meier , Bjoern H Menze , Harrison Moy , Klara Osenberg , Marie Piraud , Zachary Reitman , Russell Takeshi Shinohara , Chunhao Wang , Benedikt Wiestler , Walter Wiggins , Umber Shafique , Klara Willms , Arman Avesta , Khaled Bousabarah , Satrajit Chakrabarty , Nicolo Gennaro , Wolfgang Holler , Manpreet Kaur , Pamela LaMontagne , MingDe Lin , Jan Lost , Daniel S. Marcus , Ryan Maresca , Sarah Merkaj , Gabriel Cassinelli Pedersen , Marc von Reppert , Aristeidis Sotiras , Oleg Teytelboym , Niklas Tillmans , Malte Westerhoff , Ayda Youssef , Devon Godfrey , Scott Floyd , Andreas Rauschecker , Javier Villanueva-Meyer , Irada Pfluger , Jaeyoung Cho , Martin Bendszus , Gianluca Brugnara , Justin Cramer , Gloria J. Guzman Perez-Carillo , Derek R. Johnson , Anthony Kam , Benjamin Yin Ming Kwan , Lillian Lai , Neil U. Lall , Fatima Memon , Mark Krycia , Satya Narayana Patro , Bojan Petrovic , Tiffany Y. So , Gerard Thompson , Lei Wu , E. Brooke Schrickel , Anu Bansal , Frederik Barkhof , Cristina Besada , Sammy Chu , Jason Druzgal , Alexandru Dusoi , Luciano Farage , Fabricio Feltrin , Amy Fong , Steve H. Fung , R. Ian Gray , Ichiro Ikuta , Michael Iv , Alida A. Postma , Amit Mahajan , David Joyner , Chase Krumpelman , Laurent Letourneau-Guillon , Christie M. Lincoln , Mate E. Maros , Elka Miller , Fanny Moron , Esther A. Nimchinsky , Ozkan Ozsarlak , Uresh Patel , Saurabh Rohatgi , Atin Saha , Anousheh Sayah , Eric D. Schwartz , Robert Shih , Mark S. Shiroishi , Juan E. Small , Manoj Tanwar , Jewels Valerie , Brent D. Weinberg , Matthew L. White , Robert Young , Vahe M. Zohrabian , Aynur Azizova , Melanie Maria Theresa Bruseler , Mohanad Ghonim , Mohamed Ghonim , Abdullah Okar , Luca Pasquini , Yasaman Sharifi , Gagandeep Singh , Nico Sollmann , Theodora Soumala , Mahsa Taherzadeh , Philipp Vollmuth , Martha Foltyn-Dumitru , Ajay Malhotra , Aly H. Abayazeed , Francesco Dellepiane , Philipp Lohmann , Victor M. Perez-Garcia , Hesham Elhalawani , Maria Correia de Verdier , Sanaria Al-Rubaiey , Rui Duarte Armindo , Kholod Ashraf , Moamen M. Asla , Mohamed Badawy , Jeroen Bisschop , Nima Broomand Lomer , Jan Bukatz , Jim Chen , Petra Cimflova , Felix Corr , Alexis Crawley , Lisa Deptula , Tasneem Elakhdar , Islam H. Shawali , Shahriar Faghani , Alexandra Frick , Vaibhav Gulati , Muhammad Ammar Haider , Fatima Hierro , Rasmus Holmboe Dahl , Sarah Maria Jacobs , Kuang-chun Jim Hsieh , Sedat G. Kandemirli , Katharina Kersting , Laura Kida , Sofia Kollia , Ioannis Koukoulithras , Xiao Li , Ahmed Abouelatta , Aya Mansour , Ruxandra-Catrinel Maria-Zamfirescu , Marcela Marsiglia , Yohana Sarahi Mateo-Camacho , Mark McArthur , Olivia McDonnell , Maire McHugh , Mana Moassefi , Samah Mostafa Morsi , Alexander Munteanu , Khanak K. Nandolia , Syed Raza Naqvi , Yalda Nikanpour , Mostafa Alnoury , Abdullah Mohamed Aly Nouh , Francesca Pappafava , Markand D. Patel , Samantha Petrucci , Eric Rawie , Scott Raymond , Borna Roohani , Sadeq Sabouhi , Laura M. Sanchez-Garcia , Zoe Shaked , Pokhraj P. Suthar , Talissa Altes , Edvin Isufi , Yaseen Dhemesh , Jaime Gass , Jonathan Thacker , Abdul Rahman Tarabishy , Benjamin Turner , Sebastiano Vacca , George K. Vilanilam , Daniel Warren , David Weiss , Fikadu Worede , Sara Yousry , Wondwossen Lerebo , Alejandro Aristizabal , Alexandros Karargyris , Hasan Kassem , Sarthak Pati , Micah Sheller , Katherine E. Link , Evan Calabrese , Nourel hoda Tahon , Ayman Nada , Yuri S. Velichko , Spyridon Bakas , Jeffrey D. Rudie , Mariam Aboian

Recent advancements in foundation models, such as the Segment Anything Model (SAM), have significantly impacted medical image segmentation, especially in retinal imaging, where precise segmentation is vital for diagnosis. Despite this…

Computer Vision and Pattern Recognition · Computer Science 2025-09-11 Zhihao Zhao , Yinzheng Zhao , Junjie Yang , Xiangtong Yao , Quanmin Liang , Shahrooz Faghihroohi , Kai Huang , Nassir Navab , M. Ali Nasseri

Renal tumors, especially renal cell carcinoma (RCC), show significant heterogeneity, posing challenges for diagnosis using radiology images such as MRI, echocardiograms, and CT scans. U-Net based deep learning techniques are emerging as a…

Artificial Intelligence · Computer Science 2024-10-23 Fnu Neha , Arvind K. Bansal

Uterine leiomyosarcoma (LMS) is a rare but aggressive malignancy. On imaging, it is difficult to differentiate LMS from, for example, degenerated leiomyoma (LM), a prevalent but benign condition. We curated a data set of 115 axial…

In medical imaging, accurate image segmentation is crucial for quantifying diseases, assessing prognosis, and evaluating treatment outcomes. However, existing methods lack an in-depth integration of global and local features, failing to pay…

Image and Video Processing · Electrical Eng. & Systems 2024-04-15 Yizhi Pan , Junyi Xin , Tianhua Yang , Teeradaj Racharak , Le-Minh Nguyen , Guanqun Sun

Segmentation has been a major task in neuroimaging. A large number of automated methods have been developed for segmenting healthy and diseased brain tissues. In recent years, deep learning techniques have attracted a lot of attention as a…

Image and Video Processing · Electrical Eng. & Systems 2019-07-05 Jimit Doshi , Guray Erus , Mohamad Habes , Christos Davatzikos

Accurate and robust ultrasound image segmentation is critical for computer-aided diagnostic systems. Nevertheless, the inherent challenges of ultrasound imaging, such as blurry boundaries and speckle noise, often cause traditional…

Computer Vision and Pattern Recognition · Computer Science 2025-01-03 Jiang Shang , Yuanmeng Wu , Xiaoxiang Han , Xi Chen , Qi Zhang

Cancer remains one of the leading causes of mortality worldwide, and among its many forms, brain tumors are particularly notorious due to their aggressive nature and the critical challenges involved in early diagnosis. Recent advances in…

Image and Video Processing · Electrical Eng. & Systems 2025-04-21 Mohammad Mahdi Danesh Pajouh