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Data lakes have emerged as an alternative to data warehouses for the storage, exploration and analysis of big data. In a data lake, data are stored in a raw state and bear no explicit schema. Thence, an efficient metadata system is…

Databases · Computer Science 2019-05-13 Pegdwendé Sawadogo , Tokio Kibata , Jérôme Darmont

A main challenge of data-driven sciences is how to make maximal use of the progressively expanding databases of experimental datasets in order to keep research cumulative. We introduce the idea of a modeling-based dataset retrieval engine…

Quantitative Methods · Quantitative Biology 2015-06-19 Ali Faisal , Jaakko Peltonen , Elisabeth Georgii , Johan Rung , Samuel Kaski

Design processes involve exploration, iteration, and movement across interconnected stages such as persona creation, problem framing, solution ideation, and prototyping. However, time and resource constraints often hinder designers from…

Human-Computer Interaction · Computer Science 2025-08-18 Sangho Suh , Michael Lai , Kevin Pu , Steven P. Dow , Tovi Grossman

The recent explosion of recorded digital data and its processed derivatives threatens to overwhelm researchers when analysing their experimental data or when looking up data items in archives and file systems. While current hardware…

Embodied exploration is a target-driven process that requires embodied agents to possess fine-grained perception and knowledge-enhanced decision making. While recent attempts leverage MLLMs for exploration due to their strong perceptual and…

Computer Vision and Pattern Recognition · Computer Science 2025-11-25 Gengyuan Zhang , Mingcong Ding , Jingpei Wu , Ruotong Liao , Volker Tresp

When language models answer open-ended problems, they implicitly make hidden decisions that shape their outputs, leaving users with uncontextualized answers rather than a working map of the problem; drawing on multiverse analysis from…

Human-Computer Interaction · Computer Science 2026-05-05 Andre Ye , Jenny Y. Huang , Alicia Guo , Rose Novick , Tamara Broderick , Mitchell L. Gordon

Addressing the critical need for intelligent, context-aware energy management in renewable systems, we introduce the OpenCEM Simulator and Dataset: the first open-source digital twin explicitly designed to integrate rich, unstructured…

Systems and Control · Electrical Eng. & Systems 2026-04-09 Tinko Sebastian Bartels , Ruixiang Wu , Xinyu Lu , Yikai Lu , Fanzeng Xia , Haoxiang Yang , Yue Chen , Tongxin Li

The escalating cost, extended timelines, and low success rates in pharmaceutical research demand a fundamental rethinking of biotechnology R&D infrastructure. This chapter introduces the concept of the AI-Integrated Biotechnology Hub, a…

Physics and Society · Physics 2025-10-07 Alex Zhavoronkov , Chuen Yan Leung

A primary motivation for our research in Digital Ecosystems is the desire to exploit the self-organising properties of biological ecosystems. Ecosystems are thought to be robust, scalable architectures that can automatically solve complex,…

Neural and Evolutionary Computing · Computer Science 2016-11-18 G. Briscoe , S. Sadedin , G. Paperin

Distributed digital infrastructures for computation and analytics are now evolving towards an interconnected ecosystem allowing complex applications to be executed from IoT Edge devices to the HPC Cloud (aka the Computing Continuum, the…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-09-06 Daniel Rosendo , Alexandru Costan , Gabriel Antoniu , Patrick Valduriez

In the recent years, there has been significant advancement in the areas of scientific data management and retrieval techniques, especially in terms of standards and protocols for archiving data. Oak Ridge National Laboratory Distributed…

Information Theory · Computer Science 2011-01-12 Ranjeet Devarakonda , Giri Palanisamy

The outcome of the explorative data analysis (EDA) phase is vital for successful data analysis. EDA is more effective when the user interacts with the system used to carry out the exploration. In the recently proposed paradigm of iterative…

Machine Learning · Statistics 2018-04-11 Andreas Henelius , Emilia Oikarinen , Kai Puolamäki

Recommender Systems are tools that improve how users find relevant information in web systems, so they do not face too much information. In order to generate better recommendations, the context of information should be used in the…

Information Retrieval · Computer Science 2020-07-10 Igor André Pegoraro Santana , Marcos Aurelio Domingues

The QUBES platform was conceived as a "science education gateway" and designed to accelerate innovation in undergraduate STEM education. The technical infrastructure was purpose built to provide more equitable access to professional…

Computers and Society · Computer Science 2024-10-28 Sam Donovan , M. Drew LaMar

There is much debate on how public participation and expertise can be brought together in collaborative knowledge environments. One of the experiments addressing the issue directly is Citizendium. In seeking to harvest the strengths (and…

Digital Libraries · Computer Science 2010-08-25 Tom Morris , Daniel Mietchen

The large volumes of structured data currently available, from Web tables to open-data portals and enterprise data, open up new opportunities for progress in answering many important scientific, societal, and business questions. However,…

Information Retrieval · Computer Science 2021-09-01 Sonia Castelo , Rémi Rampin , Aécio Santos , Aline Bessa , Fernando Chirigati , Juliana Freire

In this paper, we discuss the need for an integrated software stack that unites artificial intelligence (AI) and modeling and simulation (ModSim) tools to advance scientific discovery. The authors advocate for a unified AI/ModSim software…

Software Engineering · Computer Science 2024-11-15 Michael A. Heroux , Sameer Shende , Lois Curfman McInnes , Todd Gamblin , James M. Willenbring

The promise of e-Science will only be realized when data is discoverable, accessible, and comprehensible within distributed teams, across disciplines, and over the long-term--without reliance on out-of-band (non-digital) means. We have…

A primary motivation for our research in digital ecosystems is the desire to exploit the self-organising properties of biological ecosystems. Ecosystems are thought to be robust, scalable architectures that can automatically solve complex,…

Neural and Evolutionary Computing · Computer Science 2009-10-06 G. Briscoe , P. De Wilde

Movement is a fundamental aspect of animal life and plays a crucial role in determining the structure of population dynamics, communities, ecosystems, and diversity. In recent years, the recording of animal movements via GPS collars, camera…

Digital Libraries · Computer Science 2020-05-29 Brendan Hoover , Gil Bohrer , Jerod Merkle , Jennifer A. Miller