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We present VoxelMorph, a fast learning-based framework for deformable, pairwise medical image registration. Traditional registration methods optimize an objective function for each pair of images, which can be time-consuming for large…

Computer Vision and Pattern Recognition · Computer Science 2019-09-04 Guha Balakrishnan , Amy Zhao , Mert R. Sabuncu , John Guttag , Adrian V. Dalca

In recent years, analyzing task-based fMRI (tfMRI) data has become an essential tool for understanding brain function and networks. However, due to the sheer size of tfMRI data, its intrinsic complex structure, and lack of ground truth of…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-03-06 Milad Makkie , Heng Huang , Yu Zhao , Athanasios V. Vasilakos , Tianming Liu

Medical image registration is critical for aligning anatomical structures across imaging modalities such as computed tomography (CT), magnetic resonance imaging (MRI), and ultrasound. Among existing techniques, non-rigid registration (NRR)…

Image and Video Processing · Electrical Eng. & Systems 2025-12-17 Sneha Sree C. , Dattesh Shanbhag , Sudhanya Chatterjee

We present a Gauss-Newton-Krylov solver for large deformation diffeomorphic image registration. We extend the publicly available CLAIRE library to multi-node multi-graphics processing unit (GPUs) systems and introduce novel algorithmic…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-12-25 Malte Brunn , Naveen Himthani , George Biros , Miriam Mehl , Andreas Mang

This paper presents GPU performance optimization and scaling results for inference models of the Sparse Deep Neural Network Challenge 2020. Demands for network quality have increased rapidly, pushing the size and thus the memory…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-09-04 Mert Hidayetoglu , Carl Pearson , Vikram Sharma Mailthody , Eiman Ebrahimi , Jinjun Xiong , Rakesh Nagi , Wen-Mei Hwu

Labelling data is expensive and time consuming especially for domains such as medical imaging that contain volumetric imaging data and require expert knowledge. Exploiting a larger pool of labeled data available across multiple centers,…

Computer Vision and Pattern Recognition · Computer Science 2020-09-03 Daiqing Li , Amlan Kar , Nishant Ravikumar , Alejandro F Frangi , Sanja Fidler

The blind image deconvolution is a challenging, highly ill-posed nonlinear inverse problem. We introduce a Multiscale Hierarchical Decomposition Method (MHDM) that is iteratively solving variational problems with adaptive data and…

Numerical Analysis · Mathematics 2025-08-21 Tobias Wolf , Stefan Kindermann , Elena Resmerita , Luminita Vese

Deep learning-based deformable registration methods have been widely investigated in diverse medical applications. Learning-based deformable registration relies on weighted objective functions trading off registration accuracy and…

Image and Video Processing · Electrical Eng. & Systems 2023-07-21 Haoran Dou , Ning Bi , Luyi Han , Yuhao Huang , Ritse Mann , Xin Yang , Dong Ni , Nishant Ravikumar , Alejandro F. Frangi , Yunzhi Huang

The rapid advancement of generative artificial intelligence has enabled the creation of highly realistic fake facial images, posing serious threats to personal privacy and the integrity of online information. Existing deepfake detection…

Computer Vision and Pattern Recognition · Computer Science 2025-12-29 Huanhuan Yuan , Yang Ping , Zhengqin Xu , Junyi Cao , Shuai Jia , Chao Ma

Image analysis using more than one modality (i.e. multi-modal) has been increasingly applied in the field of biomedical imaging. One of the challenges in performing the multimodal analysis is that there exist multiple schemes for fusing the…

Computer Vision and Pattern Recognition · Computer Science 2018-06-19 Zhe Guo , Xiang Li , Heng Huang , Ning Guo , Quanzheng Li

The ability to register image data to a common coordinate system is a critical feature of virtually all imaging studies that require multiple subject analysis, combining single subject data from multiple modalities, or both. However, in…

Computer Vision and Pattern Recognition · Computer Science 2017-06-19 Vitaly L. Galinsky , Lawrence R. Frank

Real-time semantic segmentation, which can be visually understood as the pixel-level classification task on the input image, currently has broad application prospects, especially in the fast-developing fields of autonomous driving and drone…

Computer Vision and Pattern Recognition · Computer Science 2022-03-08 Guangwei Gao , Guoan Xu , Juncheng Li , Yi Yu , Huimin Lu , Jian Yang

We demonstrate a new computational illumination technique that achieves large space-bandwidth-time product, for quantitative phase imaging of unstained live samples in vitro. Microscope lenses can have either large field of view (FOV) or…

Optics · Physics 2015-10-16 Lei Tian , Ziji Liu , Li-Hao Yeh , Michael Chen , Jingshan Zhong , Laura Waller

We address the long-standing problem of how to learn effective pixel-based image diffusion models at scale, introducing a remarkably simple greedy growing method for stable training of large-scale, high-resolution models. without the needs…

Applications in materials and biological imaging are limited by the ability to collect high-resolution data over large areas in practical amounts of time. One solution to this problem is to collect low-resolution data and interpolate to…

Image and Video Processing · Electrical Eng. & Systems 2024-11-18 Emma J Reid , Lawrence F Drummy , Charles A Bouman , Gregery T Buzzard

Image registration is a fundamental medical image analysis task. Ideally, registration should focus on aligning semantically corresponding voxels, i.e., the same anatomical locations. However, existing methods often optimize similarity…

Computer Vision and Pattern Recognition · Computer Science 2024-02-27 Lin Tian , Zi Li , Fengze Liu , Xiaoyu Bai , Jia Ge , Le Lu , Marc Niethammer , Xianghua Ye , Ke Yan , Daikai Jin

This study presents a high-accuracy, efficient, and physically induced method for 3D point cloud registration, which is the core of many important 3D vision problems. In contrast to existing physics-based methods that merely consider…

Computer Vision and Pattern Recognition · Computer Science 2023-02-03 Zhao Mingyang , Ma Lei , Jia Xiaohong , Yan Dong-Ming , Huang Tiejun

We propose a registration algorithm for 2D CT/MRI medical images with a new unsupervised end-to-end strategy using convolutional neural networks. The contributions of our algorithm are threefold: (1) We transplant traditional image…

Computer Vision and Pattern Recognition · Computer Science 2018-01-23 Siyuan Shan , Wen Yan , Xiaoqing Guo , Eric I-Chao Chang , Yubo Fan , Yan Xu

FPGAs provide a flexible and efficient platform to accelerate rapidly-changing algorithms for computer vision. The majority of existing work focuses on accelerating image classification, while other fundamental vision problems, including…

Image and Video Processing · Electrical Eng. & Systems 2020-03-25 Qijing Huang , Dequan Wang , Yizhao Gao , Yaohui Cai , Zhen Dong , Bichen Wu , Kurt Keutzer , John Wawrzynek

The nonuniform fast Fourier transform (NUFFT) enables spectral methods for problems with irregularly spaced samples, with applications in medical imaging, molecular dynamics, and kinetic plasma simulations. Existing implementations are…

Computational Engineering, Finance, and Science · Computer Science 2026-05-12 Paul Fischill , Andreas Adelmann , Sriramkrishnan Muralikrishnan