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Bioinformatics workflows are essential for complex biological data analyses and are often described in scientific articles with source code in public repositories. Extracting detailed workflow information from articles can improve…

Computation and Language · Computer Science 2025-03-11 Clémence Sebe , Sarah Cohen-Boulakia , Olivier Ferret , Aurélie Névéol

Large-scale, transformer-based language models such as GPT-2 are pretrained on diverse corpora scraped from the internet. Consequently, they are prone to generating non-normative text (i.e. in violation of social norms). We introduce a…

Computation and Language · Computer Science 2020-11-02 Xiangyu Peng , Siyan Li , Spencer Frazier , Mark Riedl

Automated source code refactoring, particularly extract method refactoring, is a crucial and frequently employed technique during software development. Despite its importance and frequent use by practitioners, current automated techniques…

Software Engineering · Computer Science 2024-12-25 Indranil Palit , Tushar Sharma

Search agents powered by large language models can autonomously decompose queries, retrieve information, and synthesize answers through multi-step reasoning. However, the rapid growth of training methods has outpaced controlled comparison:…

Computation and Language · Computer Science 2026-05-28 Yibo Zhao , Zichen Ding , Jiayi Wu , Zun Wang , Xiang Li

Reading text from images or scanned documents via OCR models has been a longstanding focus of researchers. Intuitively, text reading is perceived as a straightforward perceptual task, and existing work primarily focuses on constructing…

Computer Vision and Pattern Recognition · Computer Science 2026-01-15 Yufeng Zhong , Lei Chen , Zhixiong Zeng , Xuanle Zhao , Deyang Jiang , Liming Zheng , Jing Huang , Haibo Qiu , Peng Shi , Siqi Yang , Lin Ma

Neural document ranking models perform impressively well due to superior language understanding gained from pre-training tasks. However, due to their complexity and large number of parameters, these (typically transformer-based) models are…

Information Retrieval · Computer Science 2022-12-02 Jurek Leonhardt , Koustav Rudra , Avishek Anand

Document-level relation extraction (RE) aims to extract the relations between entities from the input document that usually containing many difficultly-predicted entity pairs whose relations can only be predicted through relational…

Computation and Language · Computer Science 2022-11-29 Liang Zhang , Jinsong Su , Yidong Chen , Zhongjian Miao , Zijun Min , Qingguo Hu , Xiaodong Shi

Model pruning is a performance optimization technique for large language models like R1 or o3-mini. However, existing pruning methods often lead to significant performance degradation or require extensive retraining and fine-tuning. This…

Computation and Language · Computer Science 2025-05-21 Wei Jiang , Anying Fu , Youling Zhang

Large Language Model (LLM) pre-training exhausts an ever growing compute budget, yet recent research has demonstrated that careful document selection enables comparable model quality with only a fraction of the FLOPs. Inspired by efforts…

Computation and Language · Computer Science 2024-06-10 Xiang Kong , Tom Gunter , Ruoming Pang

Open Information Extraction (OpenIE) is a fundamental yet challenging task in Natural Language Processing, which involves extracting all triples (subject, predicate, object) from a given sentence. While labeling-based methods have their…

Computation and Language · Computer Science 2024-06-27 Zhiyuan Fan , Shizhu He

The conventional use of the Retrieval-Augmented Generation (RAG) architecture has proven effective for retrieving information from diverse documents. However, challenges arise in handling complex table queries, especially within PDF…

Machine Learning · Computer Science 2024-02-13 Uday Allu , Biddwan Ahmed , Vishesh Tripathi

We present an end-to-end differentiable training method for retrieval-augmented open-domain question answering systems that combine information from multiple retrieved documents when generating answers. We model retrieval decisions as…

Computation and Language · Computer Science 2021-12-07 Devendra Singh Sachan , Siva Reddy , William Hamilton , Chris Dyer , Dani Yogatama

Abstractive summarization is the task of compressing a long document into a coherent short document while retaining salient information. Modern abstractive summarization methods are based on deep neural networks which often require large…

Retrieval-augmented language models can better adapt to changes in world state and incorporate long-tail knowledge. However, most existing methods retrieve only short contiguous chunks from a retrieval corpus, limiting holistic…

Computation and Language · Computer Science 2024-02-01 Parth Sarthi , Salman Abdullah , Aditi Tuli , Shubh Khanna , Anna Goldie , Christopher D. Manning

We propose a new grammar-based language for defining information-extractors from documents (text) that is built upon the well-studied framework of document spanners for extracting structured data from text. While previously studied…

Databases · Computer Science 2023-01-25 Liat Peterfreund

Generative information retrieval (GenIR) is a promising neural retrieval paradigm that formulates document retrieval as a document identifier (docid) generation task, allowing for end-to-end optimization toward a unified global retrieval…

Information Retrieval · Computer Science 2026-05-26 Kidist Amde Mekonnen , Yubao Tang , Maarten de Rijke

Over the past decade, extensive research efforts have been dedicated to the extraction of information from textual process descriptions. Despite the remarkable progress witnessed in natural language processing (NLP), information extraction…

Computation and Language · Computer Science 2024-07-29 Julian Neuberger , Lars Ackermann , Han van der Aa , Stefan Jablonski

Inspirational quotes from famous individuals are often used to convey thoughts in news articles, essays, and everyday conversations. In this paper, we propose a novel context-based quote extraction system that aims to extract the most…

Computation and Language · Computer Science 2025-02-18 Sayantan Adak , Animesh Mukherjee

Retrieval Augmented Generation (RAG) is a technique used to augment Large Language Models (LLMs) with contextually relevant, time-critical, or domain-specific information without altering the underlying model parameters. However,…

Information Retrieval · Computer Science 2024-08-20 Laurent Mombaerts , Terry Ding , Adi Banerjee , Florian Felice , Jonathan Taws , Tarik Borogovac

Retrieval-Augmented Generation (RAG) has emerged as a promising paradigm for improving the timeliness of knowledge updates and the factual accuracy of large language models. However, incorporating a large volume of retrieved documents…

Computation and Language · Computer Science 2026-05-29 Ziqiang Cui , Yunpeng Weng , Xing Tang , Peiyang Liu , Shiwei Li , Bowei He , Jiamin Chen , Yansen Zhang , Xiuqiang He , Chen Ma
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