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Network theory has often disregarded many-body relationships, solely focusing on pairwise interactions: neglecting them, however, can lead to misleading representations of complex systems. Hypergraphs represent a suitable framework for…

Social and Information Networks · Computer Science 2025-07-16 Fabio Saracco , Giovanni Petri , Renaud Lambiotte , Tiziano Squartini

Hypergraphs are powerful mathematical structures that can model complex, high-order relationships in various domains, including social networks, bioinformatics, and recommender systems. However, generating realistic and diverse hypergraphs…

Machine Learning · Computer Science 2026-03-11 Dorian Gailhard , Enzo Tartaglione , Lirida Naviner , Jhony H. Giraldo

Graphs are a standard framework for describing dynamical processes shaped by pairwise interactions among agents. But many systems involve interactions in groups of three or more agents. Here, we develop a method of "$\ell$-hyperedge…

Physics and Society · Physics 2026-05-25 Anzhi Sheng , Alex McAvoy , Ye Tian , Silun Zhang , Angela Fontan , Joshua B. Plotkin

Higher-order interactions (HOIs) in complex systems, such as scientific collaborations, multi-protein complexes, and multi-user communications, are commonly modeled as hypergraphs, where each hyperedge (i.e., a subset of nodes) represents…

Social and Information Networks · Computer Science 2025-10-21 Hyunjin Choo , Fanchen Bu , Hyunjin Hwang , Young-Gyu Yoon , Kijung Shin

We demonstrate that graph-based models are fully capable of representing higher-order interactions, and have a long history of being used for precisely this purpose. This stands in contrast to a common claim in the recent literature on…

Physics and Society · Physics 2026-02-20 Tiago P. Peixoto , Leto Peel , Thilo Gross , Manlio De Domenico

Node importance estimation (NIE) in heterogeneous knowledge graphs is a critical yet challenging task, essential for applications such as recommendation, knowledge reasoning, and question answering. Existing methods often rely on pairwise…

Artificial Intelligence · Computer Science 2025-12-16 Jiawen Chen , Yanyan He , Qi Shao , Mengli Wei , Duxin Chen , Wenwu Yu , Yanlong Zhao

Hypergraphs that can depict interactions beyond pairwise edges have emerged as an appropriate representation for modeling polyadic relations in complex systems. With the recent surge of interest in researching hypergraphs, the centrality…

Physics and Society · Physics 2022-08-10 Xiao-Wen Xie , Xiu-Xiu Zhan , Zi-Ke Zhang , Chuang Liu

This paper introduces a novel hypergraph classification algorithm. The use of hypergraphs in this framework has been widely studied. In previous work, hypergraph models are typically constructed using distance or attribute based methods.…

Machine Learning · Computer Science 2024-05-27 Samuel Barton , Adelle Coster , Diane Donovan , James Lefevre

Generating large synthetic attributed graphs with node labels is an important task to support various experimental studies for graph analysis methods. Existing graph generators fail to simultaneously simulate the relationships between…

Social and Information Networks · Computer Science 2023-02-14 Seiji Maekawa , Yuya Sasaki , George Fletcher , Makoto Onizuka

Hypergraphs, which belong to the family of higher-order networks, are a natural and powerful choice for modeling group interactions in the real world. For example, when modeling collaboration networks, which may involve not just two but…

Social and Information Networks · Computer Science 2025-02-19 Geon Lee , Fanchen Bu , Tina Eliassi-Rad , Kijung Shin

Most statistical models for networks focus on pairwise interactions between nodes. However, many real-world networks involve higher-order interactions among multiple nodes, such as co-authors collaborating on a paper. Hypergraphs provide a…

Methodology · Statistics 2025-09-16 Yichao Chen , Jingfei Zhang , Ji Zhu

Many real-world data can be represented as heterogeneous graphs with different types of nodes and connections. Heterogeneous graph neural network model aims to embed nodes or subgraphs into low-dimensional vector space for various…

Artificial Intelligence · Computer Science 2024-12-24 Xinjun Cai , Jiaxing Shang , Fei Hao , Dajiang Liu , Linjiang Zheng

Many real-world heterogeneous graphs exhibit pronounced heterophily, where connected nodes often have dissimilar labels or play different semantic roles. In such settings, standard heterogeneous graph neural networks that aggregate messages…

Machine Learning · Computer Science 2026-05-07 Xinyi Li , Ming Li , Lu Bai , Lixin Cui , Feilong Cao , Ke Lv , Yunliang Jiang , Pietro Liò

An emerging trend in deep learning research focuses on the applications of graph neural networks (GNNs) for mesh-based continuum mechanics simulations. Most of these learning frameworks operate on graphs wherein each edge connects two…

Fluid Dynamics · Physics 2024-10-08 Rui Gao , Indu Kant Deo , Rajeev K. Jaiman

Heterogeneous graphs (HGs) are composed of multiple types of nodes and edges, making it more effective in capturing the complex relational structures inherent in the real world. However, in real-world scenarios, labeled data is often…

Machine Learning · Computer Science 2025-08-20 Ruobing Jiang , Yacong Li , Haobing Liu , Yanwei Yu

There are a number of existing studies analysing the convergence behaviour of graph neural networks on large random graphs. Unfortunately, the majority of these studies do not model correlations between node features, which would naturally…

Machine Learning · Computer Science 2026-02-19 Mohammed Zain Ali Ahmed

Understanding the data-generating process is essential for building machine learning models that generalise well while ensuring robustness and interpretability. This paper addresses the fundamental challenge of modelling the data generation…

Machine Learning · Computer Science 2025-08-11 Bohan Tang , Keyue Jiang , Laura Toni , Siheng Chen , Xiaowen Dong

A hypergraph is a generalization of an ordinary graph, and it naturally represents group interactions as hyperedges (i.e., arbitrary-sized subsets of nodes). Such group interactions are ubiquitous in many domains: the sender and receivers…

Social and Information Networks · Computer Science 2022-04-06 Hyunjin Choo , Kijung Shin

Graphs are fundamental data structures which concisely capture the relational structure in many important real-world domains, such as knowledge graphs, physical and social interactions, language, and chemistry. Here we introduce a powerful…

Machine Learning · Computer Science 2018-03-12 Yujia Li , Oriol Vinyals , Chris Dyer , Razvan Pascanu , Peter Battaglia

Graph representation learning has made major strides over the past decade. However, in many relational domains, the input data are not suited for simple graph representations as the relationships between entities go beyond pairwise…

Machine Learning · Computer Science 2021-01-20 Balasubramaniam Srinivasan , Da Zheng , George Karypis