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Applications of machine learning in chemistry are often limited by the scarcity and expense of labeled data, restricting traditional supervised methods. In this work, we introduce a framework for molecular reasoning using general-purpose…

Large language models (LLMs) have demonstrated powerful decision-making and planning capabilities in solving complicated real-world problems. LLM-based autonomous agents can interact with diverse tools (e.g., functional APIs) and generate…

Computation and Language · Computer Science 2023-10-23 Yuchen Zhuang , Xiang Chen , Tong Yu , Saayan Mitra , Victor Bursztyn , Ryan A. Rossi , Somdeb Sarkhel , Chao Zhang

Path planning in grid maps, arising from various applications, has garnered significant attention. Existing methods, such as A*, Dijkstra, and their variants, work well for small-scale maps but fail to address large-scale ones due to high…

Robotics · Computer Science 2025-12-02 Junlin Zeng , Xin Zhang , Xiang Zhao , Yan Pan

Large language models (LLMs) have demonstrated impressive capability in reasoning and planning when integrated with tree-search-based prompting methods. However, since these methods ignore the previous search experiences, they often make…

Computation and Language · Computer Science 2024-07-19 Wenyang Hui , Kewei Tu

With the rise of artificial intelligence (AI), applying large language models (LLMs) to mathematical problem-solving has attracted increasing attention. Most existing approaches attempt to improve Operations Research (OR) optimization…

Artificial Intelligence · Computer Science 2025-08-04 Bowen Zhang , Pengcheng Luo , Genke Yang , Boon-Hee Soong , Chau Yuen

Retrosynthesis is the task of breaking down a chemical compound recursively step-by-step into molecular precursors until a set of commercially available molecules is found. Consequently, the goal is to provide a valid synthesis route for a…

Large language models (LLMs) can face factual limitations when responding to time-sensitive queries about recent events that arise after their knowledge thresholds in the training corpus. Existing search-augmented approaches fall into two…

Information Retrieval · Computer Science 2025-06-11 Wentao Shi , Yiqing Shen

Large Language Models have excelled in remarkable reasoning capabilities with advanced prompting techniques, but they fall short on tasks that require exploration, strategic foresight, and sequential decision-making. Recent works propose to…

Computation and Language · Computer Science 2023-10-18 Zheyu Zhang , Zhuorui Ye , Yikang Shen , Chuang Gan

While researchers have made significant progress in enabling large language models (LLMs) to perform multi-step planning, LLMs struggle to ensure that those plans align with high-level user intent and satisfy symbolic constraints,…

Machine Learning · Computer Science 2026-05-14 Kamel Alrashedy , Vriksha Srihari , Zulfiqar Zaidi , Ridam Srivastava , Pradyumna Tambwekar , Matthew Gombolay

Current computer-aided synthesis planning (CASP) methods often treat retrosynthesis as solved once a single feasible route is identified, focusing primarily on convergence or shortest-path metrics. This view is misaligned with real-world…

Artificial Intelligence · Computer Science 2026-05-27 Friedrich Hastedt , Dongda Zhang , Antonio del Rio Chanona

Molecular discovery, when formulated as an optimization problem, presents significant computational challenges because optimization objectives can be non-differentiable. Evolutionary Algorithms (EAs), often used to optimize black-box…

Retrosynthesis analysis is pivotal yet challenging in drug discovery and organic chemistry. Despite the proliferation of computational tools over the past decade, AI-based systems often fall short in generalizing across diverse reaction…

Machine Learning · Computer Science 2024-08-21 Yifei Yang , Runhan Shi , Zuchao Li , Shu Jiang , Bao-Liang Lu , Yang Yang , Hai Zhao

Operations research (OR) is a core methodology that supports complex system decision-making, with broad applications in transportation, supply chain management, and production scheduling. However, traditional approaches that rely on…

Artificial Intelligence · Computer Science 2025-10-15 Yang Wang , Kai Li

Molecular design and synthesis planning are two critical steps in the process of molecular discovery that we propose to formulate as a single shared task of conditional synthetic pathway generation. We report an amortized approach to…

Machine Learning · Computer Science 2022-03-15 Wenhao Gao , Rocío Mercado , Connor W. Coley

The paradigm of large language model (LLM) reasoning is shifting from parameter scaling to test-time compute scaling, yet many existing approaches still rely on uniform brute-force sampling (for example, fixed best-of-N or self-consistency)…

Artificial Intelligence · Computer Science 2026-03-02 Siyuan Ma , Bo Gao , Xiaojun Jia , Simeng Qin , Tianlin Li , Ke Ma , Xiaoshuang Jia , Wenqi Ren , Yang Liu

Large Language Models (LLMs) have exhibited exceptional performance across a broad range of tasks and domains. However, they still encounter difficulties in solving mathematical problems due to the rigorous and logical nature of…

Computation and Language · Computer Science 2024-10-01 Linzhuang Sun , Hao Liang , Jingxuan Wei , Bihui Yu , Conghui He , Zenan Zhou , Wentao Zhang

Fine-tuning large language models (LLMs) using zeroth-order optimization (ZO) offers a memory-efficient alternative to gradient-based methods but suffers from slower convergence and unstable optimization due to noisy gradient estimates.…

Machine Learning · Computer Science 2025-06-24 Jikai Long , Zijian Hu , Xiaodong Yu , Jianwen Xie , Zhaozhuo Xu

We present an attention-based Transformer model for automatic retrosynthesis route planning. Our approach starts from reactants prediction of single-step organic reactions for given products, followed by Monte Carlo tree search-based…

Quantitative Methods · Quantitative Biology 2019-06-07 Kangjie Lin , Youjun Xu , Jianfeng Pei , Luhua Lai

Recent advances in large language models (LLMs) have expanded the context window to beyond 128K tokens, enabling long-document understanding and multi-source reasoning. A key challenge, however, lies in choosing between retrieval-augmented…

Computation and Language · Computer Science 2026-05-13 Yiwen Chen , Kuan Li , Fuzhen Zhuang , Deqing Wang , Zhao Zhang , Liwen Zhang , Yong Jiang , Shuai Wang , Minhao Cheng

The current technology landscape lacks a foundational AI model for solving process engineering calculations. In this work, we introduce a novel autonomous agent framework leveraging Retrieval-Augmented Instruction-Tuning (RAIT) to enhance…

Software Engineering · Computer Science 2024-08-29 Sagar Srinivas Sakhinana , Geethan Sannidhi , Venkataramana Runkana