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Related papers: Uncovering Graph Reasoning in Decoder-only Transfo…

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Mechanistic interpretability aims to reverse-engineer large language models (LLMs) into human-understandable computational circuits. However, the complexity of pretrained models often obscures the minimal mechanisms required for specific…

Computation and Language · Computer Science 2025-10-30 Rabin Adhikari

Knowledge Graphs (KGs) can serve as reliable knowledge sources for question answering (QA) due to their structured representation of knowledge. Existing research on the utilization of KG for large language models (LLMs) prevalently relies…

Computation and Language · Computer Science 2024-10-25 Kun Li , Tianhua Zhang , Xixin Wu , Hongyin Luo , James Glass , Helen Meng

Chain-of-thought (CoT) reasoning has enabled transformer-based language models to excel at complex mathematics and multi-step planning. However, in standard decoder-only architectures, these reasoning steps are externalized in natural…

Computation and Language · Computer Science 2025-09-30 Wenquan Lu , Yuechuan Yang , Kyle Lee , Yanshu Li , Enqi Liu

Evaluating the graph comprehension and reasoning abilities of Large Language Models (LLMs) is challenging and often incomplete. Existing benchmarks focus primarily on pure graph understanding, lacking a comprehensive evaluation across all…

Artificial Intelligence · Computer Science 2025-02-27 Zike Yuan , Ming Liu , Hui Wang , Bing Qin

Transformers, adapted from natural language processing, are emerging as a leading approach for graph representation learning. Contemporary graph transformers often treat nodes or edges as separate tokens. This approach leads to…

Machine Learning · Computer Science 2023-10-04 Zihan Pengmei , Zimu Li , Chih-chan Tien , Risi Kondor , Aaron R. Dinner

We investigate the capabilities of transformer models on relational reasoning tasks. In these tasks, models are trained on a set of strings encoding abstract relations, and are then tested out-of-distribution on data that contains symbols…

Computation and Language · Computer Science 2024-04-17 Enric Boix-Adsera , Omid Saremi , Emmanuel Abbe , Samy Bengio , Etai Littwin , Joshua Susskind

While modern transformer neural networks achieve grandmaster-level performance in chess and other reasoning tasks, their internal computation process remains largely opaque. Focusing on Leela Chess Zero (LC0), we introduce a sparse…

Machine Learning · Computer Science 2026-04-14 Rui Lin , Zhenyu Jin , Guancheng Zhou , Xuyang Ge , Wentao Shu , Jiaxing Wu , Junxuan Wang , Zhengfu He , Junping Zhang , Xipeng Qiu

There has been a surge of recent interest in learning representations for graph-structured data. Graph representation learning methods have generally fallen into three main categories, based on the availability of labeled data. The first,…

Machine Learning · Computer Science 2022-04-13 Ines Chami , Sami Abu-El-Haija , Bryan Perozzi , Christopher Ré , Kevin Murphy

A recent body of work has demonstrated that Transformer embeddings can be linearly decomposed into well-defined sums of factors, that can in turn be related to specific network inputs or components. There is however still a dearth of work…

Computation and Language · Computer Science 2023-10-12 Timothee Mickus , Raúl Vázquez

Transformer large language models (LLMs) have sparked admiration for their exceptional performance on tasks that demand intricate multi-step reasoning. Yet, these models simultaneously show failures on surprisingly trivial problems. This…

Large language models show great potential in unstructured data understanding, but still face significant challenges with graphs due to their structural hallucination. Existing approaches mainly either verbalize graphs into natural…

Computation and Language · Computer Science 2026-02-03 Jingyao Wu , Bin Lu , Zijun Di , Xiaoying Gan , Meng Jin , Luoyi Fu , Xinbing Wang , Chenghu Zhou

The extent to which decoder-only language models (LMs) engage in planning, that is, organizing intermediate computations to support coherent long-range generation, remains an important question, with implications for interpretability,…

Artificial Intelligence · Computer Science 2026-02-17 Muhammed Ustaomeroglu , Baris Askin , Gauri Joshi , Carlee Joe-Wong , Guannan Qu

In many reasoning tasks, large language models (LLMs) rely on structured external knowledge, such as graphs and tables, which is typically linearized into sequential token representations. However, even when sufficient knowledge is…

Computation and Language · Computer Science 2026-05-27 Shanghao Li , Jinda Han , Yibo Wang , Yuanjie Zhu , Zihe Song , Langzhou He , Kenan Kamel A Alghythee , Philip S. Yu

Graphs have become a central representation in machine learning for capturing relational and structured data across various domains. Traditional graph neural networks often struggle to capture long-range dependencies between nodes due to…

Machine Learning · Computer Science 2025-08-26 Leon Dimitrov

Despite that going deep has proven successful in many neural architectures, the existing graph transformers are relatively shallow. In this work, we explore whether more layers are beneficial to graph transformers, and find that current…

Machine Learning · Computer Science 2023-03-02 Haiteng Zhao , Shuming Ma , Dongdong Zhang , Zhi-Hong Deng , Furu Wei

We investigate the mechanisms that arise when transformers are trained to solve arithmetic on sequences where tokens are variables whose meaning is determined only through their interactions in-context. While prior work has studied…

Computation and Language · Computer Science 2026-02-26 Eric Todd , Jannik Brinkmann , Rohit Gandikota , David Bau

Graph learning has attracted significant attention due to its widespread real-world applications. Current mainstream approaches rely on text node features and obtain initial node embeddings through shallow embedding learning using GNNs,…

Artificial Intelligence · Computer Science 2025-02-13 Chuanqi Shi , Yiyi Tao , Hang Zhang , Lun Wang , Shaoshuai Du , Yixian Shen , Yanxin Shen

Large language models (LLMs) demonstrate great potential for problems with implicit graphical structures, while recent works seek to enhance the graph reasoning capabilities of LLMs through specialized instruction tuning. The resulting…

Computation and Language · Computer Science 2024-10-14 Yizhuo Zhang , Heng Wang , Shangbin Feng , Zhaoxuan Tan , Xiaochuang Han , Tianxing He , Yulia Tsvetkov

Graph Transformers (GTs) have demonstrated a strong capability in modeling graph structures by addressing the intrinsic limitations of graph neural networks (GNNs), such as over-smoothing and over-squashing. Recent studies have proposed…

Machine Learning · Computer Science 2025-02-28 Chaohao Yuan , Kangfei Zhao , Ercan Engin Kuruoglu , Liang Wang , Tingyang Xu , Wenbing Huang , Deli Zhao , Hong Cheng , Yu Rong

Learning to compute, the ability to model the functional behavior of a circuit graph, is a fundamental challenge for graph representation learning. Yet, the dominant paradigm is architecturally mismatched for this task. This flawed…

Artificial Intelligence · Computer Science 2026-02-10 Ziyang Zheng , Jiaying Zhu , Jingyi Zhou , Qiang Xu
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