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Modeling the spread of COVID-19 is crucial for informing public health policy. All models for COVID-19 epidemiology rely on parameters describing the dynamics of the infection process. The meanings of epidemiological parameters like R_0,…

Other Quantitative Biology · Quantitative Biology 2020-07-13 Yinon M. Bar-On , Ron Sender , Avi I. Flamholz , Rob Phillips , Ron Milo

Ending the HIV/AIDS pandemic is among the Sustainable Development Goals for the next decade. In order to overcome the gap between the need for care and the available resources, better understanding of HIV epidemics is needed to guide policy…

Applications · Statistics 2020-09-03 Zhou Lan , Le Bao

Deterministic compartmental models have been used extensively in modeling epidemic propagation. These models are required to fit available data and numerical procedures are often implemented to this end. But not every model architecture is…

Populations and Evolution · Quantitative Biology 2021-11-23 Gabriel Turinici

The pattern formation and spatial spread of infectious populations are investigated using a kernel-based Susceptible-Infectious-Recovered (SIR) model applicable across a wide range of basic reproduction numbers $R_o$. The focus is on the…

Physics and Society · Physics 2022-09-13 Shuolin Li , Craig Henriquez , Gabriel Katul

At the onset of the Covid-19 pandemic, a number of non-pharmaceutical interventions have been implemented in order to reduce transmission, thus leading to multiple phases of transmission. The disease reproduction number $R_t$, a way of…

Applications · Statistics 2023-05-03 Petros Barmpounakis , Nikolaos Demiris

Susceptible-Invective-Recovered (SIR) mathematical models are in high demand due to the COVID-19 pandemic. They are used in their standard formulation, or through the many variants, trying to fit and hopefully predict the number of new…

Populations and Evolution · Quantitative Biology 2020-05-19 Ben-Hur Francisco Cardoso , Sebastián Gonçalves

We propose an epidemiological model using an adaptive dynamic three compartment (with four states) SIR(D) model. Our approach is similar to non-parametric curve fitting in spirit and automatically adapts to key external factors, such as…

Applications · Statistics 2020-09-14 Madhuchhanda Bhattacharjee , Arup Bose

Epidemic outbreaks are an important healthcare challenge, especially in developing countries where they represent one of the major causes of mortality. Approaches that can rapidly target subpopulations for surveillance and control are…

Social and Information Networks · Computer Science 2018-07-04 Stefania Rubrichi , Zbigniew Smoreda , Mirco Musolesi

As COVID-19 is rapidly spreading across the globe, short-term modeling forecasts provide time-critical information for decisions on containment and mitigation strategies. A main challenge for short-term forecasts is the assessment of key…

Populations and Evolution · Quantitative Biology 2022-11-17 Jonas Dehning , Johannes Zierenberg , F. Paul Spitzner , Michael Wibral , Joao Pinheiro Neto , Michael Wilczek , Viola Priesemann

Spatial association measures for univariate static spatial data are widely used. When the data is in the form of a collection of spatial vectors with the same temporal domain of interest, we construct a measure of similarity between the…

Methodology · Statistics 2023-09-26 Divya Kappara , Arup Bose , Madhuchhanda Bhattacharjee

The COVID-19 crisis has shown that we can only prevent the risk of mass contagion through timely, large-scale, coordinated, and decisive actions. However, frequently the models used by experts [from whom decision-makers get their main…

Applications · Statistics 2021-03-08 Mauricio Herrera

Lately, concepts such as lockdown, quarantine, and social distancing have become very relevant since they have been associated with essential measures in the prevention and mitigation of COVID-19. While some conclusions about the…

Physics and Society · Physics 2023-04-04 Eric Rozan , Sebastian Bouzat , Marcelo N Kuperman

We propose a stochastic SIR model, specified as a system of stochastic differential equations, to analyse the data of the Italian COVID-19 epidemic, taking also into account the under-detection of infected and recovered individuals in the…

Populations and Evolution · Quantitative Biology 2021-02-22 Sara Pasquali , Antonio Pievatolo , Antonella Bodini , Fabrizio Ruggeri

This work covers the analysis of the COVID 19 spread in different countries and dealing the main feature of COVID 19 growth, which is the spread due to the social-contact structure, which is governed by the parameter \b{eta}. The dependency…

Populations and Evolution · Quantitative Biology 2020-04-03 Jay Naresh Dhanwant , V. Ramanathan

Infection can spread easily on networks with heterogeneous degree distribution. Here, we considered targeted immunization on such networks, wherein a fraction of individuals with the highest connectivity are immunized. To quantify the…

Physics and Society · Physics 2021-11-05 Satoru Morita

As the COVID-19 pandemic continues to ravage the world, it is of critical significance to provide a timely risk prediction of the COVID-19 in multi-level. To implement it and evaluate the public health policies, we develop a framework with…

Physics and Society · Physics 2020-12-02 Lingxiao Wang , Tian Xu , Till Hannes Stoecker , Horst Stoecker , Yin Jiang , Kai Zhou

We propose a method for constructing confidence intervals that account for many forms of spatial correlation. The interval has the familiar `estimator plus and minus a standard error times a critical value' form, but we propose new methods…

Econometrics · Economics 2021-02-19 Ulrich K. Müller , Mark W. Watson

Spatio-temporal models for count data are required in a wide range of scientific fields and they have become particularly crucial nowadays because of their ability to analyse COVID-19-related data. Models for count data are needed when the…

Applications · Statistics 2021-04-16 María Victoria Ibáñez , Marina Martínez-Garcia , Amelia Simó

Intercity travel is one of the most important parameters for combating a pandemic. The ongoing COVID-19 pandemic has resulted in different computational studies involving intercity connections. In this study, the effects of intercity…

Physics and Society · Physics 2025-02-18 Emir Baysazan , A. Nihat Berker , Hasan Mandal , Hakan Kaygusuz

Compartmental models are valuable tools for investigating infectious diseases. Researchers building such models typically begin with a simple structure where compartments correspond to individuals with different epidemiological statuses,…

Populations and Evolution · Quantitative Biology 2023-07-21 Darren Flynn-Primrose , Steven C. Walker , Michael Li , Benjamin M. Bolker , David J. D. Earn , Jonathan Dushoff
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