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Effective treatments that prevent or reduce drug relapse vulnerability should be developed to relieve the high burden of drug addiction to society. This will only be possible by enhancing the understanding of the molecular mechanisms…

Biological Physics · Physics 2022-06-29 Mayte Bonilla-Quintana , Padmini Rangamani

There is a broad need in the neuroscience community to understand and visualize large-scale recordings of neural activity, big data acquired by tens or hundreds of electrodes simultaneously recording dynamic brain activity over minutes to…

Neurons and Cognition · Quantitative Biology 2015-11-24 Bingni W. Brunton , Lise A. Johnson , Jeffrey G. Ojemann , J. Nathan Kutz

Spiking neurons can perform spatiotemporal feature detection by nonlinear synaptic and dendritic integration of presynaptic spike patterns. Multicompartment models of non-linear dendrites and related neuromorphic circuit designs enable…

Neural and Evolutionary Computing · Computer Science 2021-06-02 Mattias Nilsson , Foteini Liwicki , Fredrik Sandin

Functional properties of neurons are strongly coupled with their morphology. Changes in neuronal activity alter morphological characteristics of dendritic spines. First step towards understanding the structure-function relationship is to…

Computer Vision and Pattern Recognition · Computer Science 2016-07-20 Muhammad Usman Ghani , Ertunc Erdil , Sumeyra Demir Kanik , Ali Ozgur Argunsah , Anna Felicity Hobbiss , Inbal Israely , Devrim Unay , Tolga Tasdizen , Mujdat Cetin

This paper presents a spike-based model which employs neurons with functionally distinct dendritic compartments for classifying high dimensional binary patterns. The synaptic inputs arriving on each dendritic subunit are nonlinearly…

Neural and Evolutionary Computing · Computer Science 2014-11-26 Shaista Hussain , Shih-Chii Liu , Arindam Basu

A high degree of structural complexity arises in dynamic neuronal dendrites due to extensive branching patterns and diverse spine morphologies, which enable the nervous system to adjust function, construct complex input pathways and thereby…

Soft Condensed Matter · Physics 2026-03-04 Fabian H. Kreten , Barbara A. Niemeyer , Ludger Santen , Reza Shaebani

The removal of non-brain signal from magnetic resonance imaging (MRI) data, known as skull-stripping, is an integral component of many neuroimage analysis streams. Despite their abundance, popular classical skull-stripping methods are…

Image and Video Processing · Electrical Eng. & Systems 2022-07-27 Andrew Hoopes , Jocelyn S. Mora , Adrian V. Dalca , Bruce Fischl , Malte Hoffmann

Developing automated and semi-automated solutions for reconstructing wiring diagrams of the brain from electron micrographs is important for advancing the field of connectomics. While the ultimate goal is to generate a graph of neuron…

Computer Vision and Pattern Recognition · Computer Science 2016-08-09 William Gray Roncal , Colin Lea , Akira Baruah , Gregory D. Hager

Dendritic spines are small membranous structures that protrude from the neuronal dendrite. Each spine contains a synaptic contact site that may connect its parent dendrite to the axons of neighboring neurons. Dendritic spines are markedly…

Biological Physics · Physics 2015-11-02 Karsten Miermans , Remy Kusters , Casper Hoogenraad , Cornelis Storm

Excitatory synaptic connections in the adult neocortex consist of multiple synaptic contacts, almost exclusively formed on dendritic spines. Changes of dendritic spine shape and volume, a correlate of synaptic strength, can be tracked in…

Neurons and Cognition · Quantitative Biology 2018-03-13 Moritz Deger , Alexander Seeholzer , Wulfram Gerstner

Developmental plasticity plays a prominent role in shaping the brain's structure during ongoing learning in response to dynamically changing environments. However, the existing network compression methods for deep artificial neural networks…

Neural and Evolutionary Computing · Computer Science 2024-10-29 Bing Han , Feifei Zhao , Yi Zeng , Guobin Shen

Deep learning has seen remarkable developments over the last years, many of them inspired by neuroscience. However, the main learning mechanism behind these advances - error backpropagation - appears to be at odds with neurobiology. Here,…

Neurons and Cognition · Quantitative Biology 2018-10-29 João Sacramento , Rui Ponte Costa , Yoshua Bengio , Walter Senn

Biological neurons can detect complex spatio-temporal features in spiking patterns via their synapses spread across across their dendritic branches. This is achieved by modulating the efficacy of the individual synapses, and by exploiting…

Emerging Technologies · Computer Science 2023-12-15 Melika Payvand , Simone D'Agostino , Filippo Moro , Yigit Demirag , Giacomo Indiveri , Elisa Vianello

An increasing number of neuroscience studies are highlighting the importance of spatial dendritic branching in pyramidal neurons in the brain for supporting non-linear computation through localized synaptic integration. In particular,…

Dendritic computation endows biological neurons with rich nonlinear integration and high representational capacity, yet it is largely missing in existing deep spiking neural networks (SNNs). Although detailed multi-compartment models can…

Neural and Evolutionary Computing · Computer Science 2025-12-23 Yifan Huang , Wei Fang , Zhengyu Ma , Guoqi Li , Yonghong Tian

Spatiotemporal information is at the core of diverse sensory processing and computational tasks. Feed-forward spiking neural networks can be used to solve these tasks while offering potential benefits in terms of energy efficiency by…

Machine Learning · Computer Science 2026-03-11 Jann Krausse , Zhe Su , Kyrus Mama , Maryada , Klaus Knobloch , Giacomo Indiveri , Jürgen Becker

Modeling spinal motion is fundamental to understanding human biomechanics, yet remains underexplored in computer vision due to the spine's complex multi-joint kinematics and the lack of large-scale 3D annotations. We present a…

Computer Vision and Pattern Recognition · Computer Science 2026-03-13 Muhammad Saif Ullah Khan , Didier Stricker

Morphological reconstruction of dendritic spines from fluorescent microscopy is a critical open problem in neuro-image analysis. Existing segmentation tools are ill-equipped to handle thin spines with long, poorly illuminated neck…

Image and Video Processing · Electrical Eng. & Systems 2024-10-30 Sammit Jain , Suvadip Mukherjee , Lydia Danglot , Jean-Christophe Olivo-Marin

We present feature finding and tracking algorithms in 3D in living cells, and demonstrate their utility to measure metrics important in cell biological processes. We developed a computational imaging hybrid approach that combines automated…

Biological Physics · Physics 2015-04-06 Kemp Plumb , Sarah Elaz , Vincent Pelletier , Maria L. Kilfoil

The time-dependent fields obtained by solving partial differential equations in two and more dimensions quickly overwhelm the analytical capabilities of the human brain. A meaningful insight into the temporal behaviour can be obtained by…

Numerical Analysis · Mathematics 2024-04-04 Miha Rot , Martin Horvat , Gregor Kosec
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