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Biological systems commonly exhibit complex spatiotemporal patterns whose underlying generative mechanisms pose a significant analytical challenge. Traditional approaches to spatiodynamic inference rely on dimensionality reduction through…

Quantitative Methods · Quantitative Biology 2025-08-01 Jun Won Park , Kangyu Zhao , Sanket Rane

In this paper, we introduce a new deep learning framework for discovering the phase field models from existing image data. The new framework embraces the approximation power of physics informed neural networks (PINN), and the computational…

Numerical Analysis · Mathematics 2020-07-10 Jia Zhao

Comprehending the interplay between spatial and temporal characteristics of neural dynamics can contribute to our understanding of information processing in the human brain. Graph neural networks (GNNs) provide a new possibility to…

Neurons and Cognition · Quantitative Biology 2022-04-29 Simon Wein , Alina Schüller , Ana Maria Tomé , Wilhelm M. Malloni , Mark W. Greenlee , Elmar W. Lang

This study introduces the Conditional Neural Field Latent Diffusion (CoNFiLD) model, a novel generative learning framework designed for rapid simulation of intricate spatiotemporal dynamics in chaotic and turbulent systems within…

Fluid Dynamics · Physics 2024-03-18 Pan Du , Meet Hemant Parikh , Xiantao Fan , Xin-Yang Liu , Jian-Xun Wang

To make sense of their surroundings, intelligent systems must transform complex sensory inputs to structured codes that are reduced to task-relevant information such as object category. Biological agents achieve this in a largely autonomous…

Computer Vision and Pattern Recognition · Computer Science 2024-07-09 Robin Weiler , Matthias Brucklacher , Cyriel M. A. Pennartz , Sander M. Bohté

Modeling brain dynamics to better understand and control complex behaviors underlying various cognitive brain functions are of interests to engineers, mathematicians, and physicists from the last several decades. With a motivation of…

Neurons and Cognition · Quantitative Biology 2019-08-21 Benjamin Plaster , Gautam Kumar

Brain activity is intrinsically a neural dynamic process constrained by anatomical space. This leads to significant variations in spatial distribution patterns and correlation patterns of neural activity across variable and heterogeneous…

Machine Learning · Computer Science 2026-03-10 Hongjie Jiang , Yifei Tang , Shuqiang Wang

With the fast development of various positioning techniques such as Global Position System (GPS), mobile devices and remote sensing, spatio-temporal data has become increasingly available nowadays. Mining valuable knowledge from…

Machine Learning · Computer Science 2019-06-25 Senzhang Wang , Jiannong Cao , Philip S. Yu

The identification and modeling of time-varying systems is a fundamental challenge in signal processing and system identification. To address this challenge, we propose a class of time-varying state-space model (SSM) based neural networks…

Machine Learning · Computer Science 2026-05-18 Sanja Karilanova , Subhrakanti Dey , Ayça Özçelikkale

Models of neural networks have proven their utility in the development of learning algorithms in computer science and in the theoretical study of brain dynamics in computational neuroscience. We propose in this paper a spatial neural…

Neural and Evolutionary Computing · Computer Science 2014-05-06 Lucas Antiqueira , Liang Zhao

Microclimate models are essential for linking climate to ecological processes, yet most physically based frameworks estimate temperature independently for each spatial unit and rely on simplified representations of lateral heat exchange. As…

Machine Learning · Computer Science 2026-03-17 Idan Sulami , Alon Itzkovitch , Michael R. Kearney , Moni Shahar , Ofir Levy

Learning the dynamics of spatiotemporal events is a fundamental problem. Neural point processes enhance the expressivity of point process models with deep neural networks. However, most existing methods only consider temporal dynamics…

Machine Learning · Computer Science 2024-12-10 Zihao Zhou , Xingyi Yang , Ryan Rossi , Handong Zhao , Rose Yu

$\textbf{This is the conference version of our paper: Spatiotemporal Implicit Neural Representation as a Generalized Traffic Data Learner}$. Spatiotemporal Traffic Data (STTD) measures the complex dynamical behaviors of the multiscale…

Machine Learning · Computer Science 2024-06-14 Tong Nie , Guoyang Qin , Wei Ma , Jian Sun

Dynamic imaging is essential for analyzing various biological systems and behaviors but faces two main challenges: data incompleteness and computational burden. For many imaging systems, high frame rates and short acquisition times require…

Image and Video Processing · Electrical Eng. & Systems 2024-06-12 Luke Lozenski , Mark A. Anastasio , Umberto Villa

Capturing dynamic spatiotemporal neural activity is essential for understanding large-scale brain mechanisms. Functional magnetic resonance imaging (fMRI) provides high-resolution cortical representations that form a strong basis for…

Image and Video Processing · Electrical Eng. & Systems 2026-04-01 Wanying Qu , Jianxiong Gao , Wei Wang , Yanwei Fu

Zero-shot skeleton action recognition is a non-trivial task that requires robust unseen generalization with prior knowledge from only seen classes and shared semantics. Existing methods typically build the skeleton-semantics interactions by…

Computer Vision and Pattern Recognition · Computer Science 2024-11-27 Yang Chen , Jingcai Guo , Song Guo , Dacheng Tao

State-space models (SSMs) offer a powerful framework for dynamical system analysis, wherein the temporal dynamics of the system are assumed to be captured through the evolution of the latent states, which govern the values of the…

Machine Learning · Statistics 2024-12-17 Jiahe Lin , George Michailidis

Musculoskeletal models have been widely used for detailed biomechanical analysis to characterise various functional impairments given their ability to estimate movement variables (i.e., muscle forces and joint moment) which cannot be…

Signal Processing · Electrical Eng. & Systems 2022-07-05 Jie Zhang , Yihui Zhao , Fergus Shone , Zhenhong Li , Alejandro F. Frangi , Shengquan Xie , Zhiqiang Zhang

We introduce a foundational model for brain dynamics that utilizes stochastic optimal control (SOC) and amortized inference. Our method features a continuous-discrete state space model (SSM) that can robustly handle the intricate and noisy…

Machine Learning · Computer Science 2025-02-10 Joonhyeong Park , Byoungwoo Park , Chang-Bae Bang , Jungwon Choi , Hyungjin Chung , Byung-Hoon Kim , Juho Lee

Understanding how biological constraints shape neural computation is a central goal of computational neuroscience. Spatially embedded recurrent neural networks provide a promising avenue to study how modelled constraints shape the combined…

Neural and Evolutionary Computing · Computer Science 2024-09-27 Cornelia Sheeran , Andrew S. Ham , Duncan E. Astle , Jascha Achterberg , Danyal Akarca