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The recent interest in using microorganisms for biofuels is motivation enough to study bioconvection and cell dispersion in tubes subject to imposed flow. To optimize light and nutrient uptake, many microorganisms swim in directions biased…

Soft Condensed Matter · Physics 2010-10-05 O. A. Croze , E. E. Ashraf , M. A. Bees

Micro-organisms usually can swim in their liquid environment by flagellar or ciliary beating. In this numerical work, we analyze the influence of flagellar beating on the orbits of a swimming cell in a shear flow. We also calculate the…

Soft Condensed Matter · Physics 2017-11-21 Levan Jibuti , Walter Zimmermann , Salima Rafaï , Philippe Peyla

We study the detention statistics of self-propelling droplet microswimmers attaching to microfluidic pillars. These droplets show negative autochemotaxis: they shed a persistent repulsive trail of spent fuel that biases them to detach from…

Soft Condensed Matter · Physics 2019-10-30 Chenyu Jin , Jérémy Vachier , Soumya Bandyopadhyay , Tamara Macharashvili , Corinna C. Maass

Microorganisms can preferentially orient and move along gradients of a chemo-attractant (i.e., chemotax) while colonies of many microorganisms can collectively undergo complex dynamics in response to chemo-attractants that they themselves…

Biological Physics · Physics 2013-10-30 Enkeleida Lushi , Raymond E. Goldstein , Michael J. Shelley

Hydrodynamic interactions can give rise to a collective motion of rotating particles. This, in turn, can lead to coherent fluid flows. Using large scale hydrodynamic simulations, we study the coupling between these two in spinner monolayers…

Fluid Dynamics · Physics 2023-08-23 Zaiyi Shen , Juho S. Lintuvuori

We present the first time-resolved measurements of the oscillatory velocity field induced by swimming unicellular microorganisms. Confinement of the green alga C. reinhardtii in stabilized thin liquid films allows simultaneous tracking of…

Fluid Dynamics · Physics 2015-05-19 Jeffrey S. Guasto , Karl A. Johnson , J. P. Gollub

Deposits from evaporating drops have shown to take a variety of shapes, depending on the physicochemical properties of both solute and solvent. Classically, the evaporation of drops of colloidal suspensions leads to the so-called coffee…

Soft Condensed Matter · Physics 2021-05-04 Marius R. Bittermann , Daniel Bonn , Sander Woutersen , Antoine Deblais

We study numerically the hydrodynamics of a self-propelled particle system, consisting of spherical squirmers sedimented on a flat surface. We observe the emergence of dynamic structures, due to the interplay of particle-particle and…

Soft Condensed Matter · Physics 2019-12-20 Zaiyi Shen , Juho S. Lintuvuori

Microorganisms ofter move in confined, disordered environments, where hydrodynamic couplings can modify their transport behavior. Using extensive finite-element simulations, we investigate the dynamics of microswimmers -- modeled as…

Soft Condensed Matter · Physics 2026-03-24 Mirko Residori , Sebastian Aland , Christina Kurzthaler

The measurement of a quantitative and macroscopic parameter to estimate the global motility of a large population of swimming biological cells is a challenge Experiments on the rheology of active suspensions have been performed. Effective…

Soft Condensed Matter · Physics 2014-12-12 Salima Rafai , Levan Jibuti , Philippe Peyla

We use moving light patterns to control the motion of {\it Escherichia coli} bacteria whose motility is photo-activated. Varying the pattern speed controls the magnitude and direction of the bacterial flux, and therefore the accumulation of…

We investigate the hydrodynamic stability and transport of magnetic microswimmers in an external field using a kinetic theory framework. Combining linear stability analysis and nonlinear 3D continuum simulations, we show that for…

Soft Condensed Matter · Physics 2019-02-20 Fabian R. Koessel , Sara Jabbari-Farouji

Self-propelled bacteria are marvels of nature with a potential to power dynamic materials and microsystems of the future. The challenge is in commanding their chaotic behavior. By dispersing swimming Bacillus subtilis in a…

Soft Condensed Matter · Physics 2016-12-21 Chenhui Peng , Taras Turiv , Yubing Guo , Qi-Huo Wei , Oleg D. Lavrentovich

Active matter exhibits various forms of non-equilibrium states in the absence of external forcing, including macroscopic steady-state currents. Such states are often too complex to be modelled from first principles and our understanding of…

Soft Condensed Matter · Physics 2020-09-17 Viktor Škultéty , Cesare Nardini , Joakim Stenhammar , Davide Marenduzzo , Alexander Morozov

We investigate the instability of a tubular fluid membranes made of a water soluble surfactant. The tubules are obtained at high salinities. The instability is due to the introduction within the vesicle multilayer of an alkane. We measure…

Soft Condensed Matter · Physics 2015-06-25 Sahraoui Chaieb , Sergio Rica

Both natural and artificial small-scale swimmers may often self-propel in environments subject to complex geometrical constraints. While most past theoretical work on low-Reynolds number locomotion addressed idealised geometrical…

Fluid Dynamics · Physics 2017-11-16 Alexander Chamolly , Takuji Ishikawa , Eric Lauga

We introduce a device developed to perform a 3D tracking of passive or active particles under flow, confined in a medium of hundreds micrometers wide. Micro-objects are placed inside a vertical glass capillary and two mirrors are set behind…

Soft Condensed Matter · Physics 2025-06-09 J. Moscatelli , X Benoit Gonin , F. Elias

The microalga Chlamydomonas Reinhardtii (CR) is used here as a model system to study the effect of complex environments on the swimming of micro-organisms. Its motion can be modelled by a run and tumble mechanism so that it describes a…

Soft Condensed Matter · Physics 2019-03-27 Marvin Brun-Cosme-Bruny , Eric Bertin , Benoît Coasne , Philippe Peyla , Salima Rafaï

We study a continuum model of overdamped self-propelled particles with an aligning interaction in two dimensions. By combining analytical and numerical work, we map out the phase diagram for generic parameters. We find that the system…

Biological Physics · Physics 2011-12-30 Arvind Gopinath , Michael F. Hagan , M. Cristina Marchetti , Aparna Baskaran

Highly concentrated active agents tend to exhibit turbulent flows, reminiscent of classical hydrodynamic turbulence, which has attracted considerable attention lately. Controlling the so-called active turbulence has long been a challenge,…

Soft Condensed Matter · Physics 2023-07-13 Kazusa Beppu , Jaakko V. I. Timonen
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