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We present a parallelizable algorithm for computing the persistent homology of a filtered chain complex. Our approach differs from the commonly used reduction algorithm by first computing persistence pairs within local chunks, then…

Algebraic Topology · Mathematics 2013-03-05 Ulrich Bauer , Michael Kerber , Jan Reininghaus

We present three methods for distributed memory parallel inverse factorization of block-sparse Hermitian positive definite matrices. The three methods are a recursive variant of the AINV inverse Cholesky algorithm, iterative refinement, and…

Numerical Analysis · Mathematics 2024-12-20 Anton G. Artemov , Elias Rudberg , Emanuel H. Rubensson

Hashing method maps similar data to binary hashcodes with smaller hamming distance, and it has received a broad attention due to its low storage cost and fast retrieval speed. However, the existing limitations make the present algorithms…

Computer Vision and Pattern Recognition · Computer Science 2016-09-29 Shifeng Zhang , Jianmin Li , Jinma Guo , Bo Zhang

We present a fast direct solver for boundary integral equations on complex surfaces in three dimensions using an extension of the recently introduced recursive strong skeletonization scheme. For problems that are not highly oscillatory, our…

Numerical Analysis · Mathematics 2023-01-16 Daria Sushnikova , Leslie Greengard , Michael O'Neil , Manas Rachh

In this paper, we present a concurrent implementation of a powerful topological thinning operator. This operator is able to act directly over grayscale images without modifying their topology. We introduce an adapted parallelization…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-03-31 Ramzi Mahmoudi , Mohamed Akil , Petr Matas

Reducing control complexity is essential for achieving large-scale quantum computing. However, reducing control knobs may compromise the ability to independently address each qubit. Recent progress in neutral atom-based platforms suggests…

Emerging Technologies · Computer Science 2024-09-05 Daniel Bochen Tan , Shuohao Ping , Jason Cong

With the rise of artificial intelligence in recent years, Deep Neural Networks (DNNs) have been widely used in many domains. To achieve high performance and energy efficiency, hardware acceleration (especially inference) of DNNs is…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-01-17 Linghao Song , Jiachen Mao , Youwei Zhuo , Xuehai Qian , Hai Li , Yiran Chen

We present efficient realization of Householder Transform (HT) based QR factorization through algorithm-architecture co-design where we achieve performance improvement of 3-90x in-terms of Gflops/watt over state-of-the-art multicore,…

Performance · Computer Science 2018-03-15 Farhad Merchant , Tarun Vatwani , Anupam Chattopadhyay , Soumyendu Raha , S K Nandy , Ranjani Narayan

Iterative methods for solving large sparse systems of linear equations are widely used in many HPC applications. Extreme scaling of these methods can be difficult, however, since global communication to form dot products is typically…

Mathematical Software · Computer Science 2020-09-29 Nick Brown , J. Mark Bull , Iain Bethune

We present two new algorithms for Householder QR factorization of Block Low-Rank (BLR) matrices: one that performs block-column-wise QR, and another that is based on tiled QR. We show how the block-column-wise algorithm exploits BLR…

Numerical Analysis · Mathematics 2022-08-15 M. Ridwan Apriansyah , Rio Yokota

Prior work on Automatically Scalable Computation (ASC) suggests that it is possible to parallelize sequential computation by building a model of whole-program execution, using that model to predict future computations, and then…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-09-21 Peter Kraft , Amos Waterland , Daniel Y Fu , Anitha Gollamudi , Shai Szulanski , Margo Seltzer

In an iterative approach for solving linear systems with ill-conditioned, symmetric positive definite (SPD) kernel matrices, both fast matrix-vector products and fast preconditioning operations are required. Fast (linear-scaling)…

Numerical Analysis · Mathematics 2021-01-13 Xin Xing , Hua Huang , Edmond Chow

Despite being a key bottleneck in many machine learning tasks, the cost of solving large linear systems has proven challenging to quantify due to problem-dependent quantities such as condition numbers. To tackle this, we consider a…

Data Structures and Algorithms · Computer Science 2025-06-18 Michał Dereziński , Daniel LeJeune , Deanna Needell , Elizaveta Rebrova

A simple method for improving cache efficiency of serial and parallel explicit finite procedure with application to casting solidification simulation over three-dimensional complex geometries is presented. The method is based on division of…

Distributed, Parallel, and Cluster Computing · Computer Science 2010-05-19 Ruhollah Tavakoli

We present a matrix-factorization algorithm that scales to input matrices with both huge number of rows and columns. Learned factors may be sparse or dense and/or non-negative, which makes our algorithm suitable for dictionary learning,…

Machine Learning · Statistics 2017-11-15 Arthur Mensch , Julien Mairal , Bertrand Thirion , Gael Varoquaux

Modern trends in data collection are bringing current mainstream techniques for database query processing to their limits. Consequently, various novel approaches for efficient query processing are being actively studied. One such approach…

Databases · Computer Science 2022-04-13 Georg Gottlob , Matthias Lanzinger , Cem Okulmus , Reinhard Pichler

A new class of parallel algorithms is introduced that can achieve a complexity of O(n^3/2) with respect to the interprocessor communication, in the exact computation of systems with pairwise mutual interactions of all elements. Hitherto,…

High Energy Physics - Lattice · Physics 2008-02-03 Th. Lippert , A. Seyfried , A. Bode , K. Schilling

High fidelity scientific simulations modeling physical phenomena typically require solving large linear systems of equations which result from discretization of a partial differential equation (PDE) by some numerical method. This step often…

Mathematical Software · Computer Science 2020-07-01 Mohammad Shafaet Islam , Qiqi Wang

With the growing maturity of additive manufacturing, the fabrication of architected or lattice-based metamaterials has become a reality for industrial applications. These materials combine lightweight design with tailored mechanical…

Numerical Analysis · Mathematics 2026-03-12 Clément Guillet , Thibaut Hirschler , Pierre Jolivet , Pablo Antolin , Robin Bouclier

We present Cyqlone, a solver for linear systems with a stage-wise optimal control structure that fully exploits the various levels of parallelism available in modern hardware. Cyqlone unifies algorithms based on the sequential Riccati…

Optimization and Control · Mathematics 2026-03-16 Pieter Pas , Panagiotis Patrinos