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A mechanism for self-organization of the degree of connectivity in model neural networks is studied. Network connectivity is regulated locally on the basis of an order parameter of the global dynamics which is estimated from an observable…

Statistical Mechanics · Physics 2009-11-07 Stefan Bornholdt , Torsten Roehl

Neural fields are receiving increased attention as a geometric representation due to their ability to compactly store detailed and smooth shapes and easily undergo topological changes. Compared to classic geometry representations, however,…

Computer Vision and Pattern Recognition · Computer Science 2023-04-26 Arturs Berzins , Moritz Ibing , Leif Kobbelt

The availability of large-scale neuronal population datasets necessitates new methods to model population dynamics and extract interpretable, scientifically translatable insights. Existing deep learning methods often overlook the biological…

Neurons and Cognition · Quantitative Biology 2024-11-14 Parsa Delavari , Ipek Oruc , Timothy H Murphy

The understanding of neural activity patterns is fundamentally linked to an understanding of how the brain's network architecture shapes dynamical processes. Established approaches rely mostly on deviations of a given network from certain…

Neurons and Cognition · Quantitative Biology 2014-09-19 Marc-Thorsten Huett , Marcus Kaiser , Claus C. Hilgetag

Hierarchies permeate the structure of real networks, whose nodes can be ranked according to different features. However, networks are far from tree-like structures and the detection of hierarchical ordering remains a challenge, hindered by…

Physics and Society · Physics 2020-10-07 Elisenda Ortiz , Guillermo García-Pérez , M. Ángeles Serrano

Neural decoding, a critical component of Brain-Computer Interface (BCI), has recently attracted increasing research interest. Previous research has focused on leveraging signal processing and deep learning methods to enhance neural decoding…

Neurons and Cognition · Quantitative Biology 2025-12-11 Gaorui Zhang , Zhizhang Yuan , Jialan Yang , Junru Chen , Li Meng , Yang Yang

Despite the remarkable success of deep neural networks in a myriad of settings, several works have demonstrated their overwhelming sensitivity to near-imperceptible perturbations, known as adversarial attacks. On the other hand, prior works…

Computer Vision and Pattern Recognition · Computer Science 2023-11-01 Sriram Balasubramanian , Gaurang Sriramanan , Vinu Sankar Sadasivan , Soheil Feizi

A central issue of the science of complex systems is the quantitative characterization of complexity. In the present work we address this issue by resorting to information geometry. Actually we propose a constructive way to associate to a -…

Mathematical Physics · Physics 2017-12-19 Roberto Franzosi , Domenico Felice , Stefano Mancini , Marco Pettini

Neural computation is associated with the emergence, reconfiguration and dissolution of cell assemblies in the context of varying oscillatory states. Here, we describe the complex spatio-temporal dynamics of cell assemblies through temporal…

Neurons and Cognition · Quantitative Biology 2020-01-20 Nicola Pedreschi , Christophe Bernard , Wesley Clawson , Pascale Quilichini , Alain Barrat , Demian Battaglia

Cognition involves dynamic reconfiguration of functional brain networks at sub-second time scale. A precise tracking of these reconfigurations to categorize visual objects remains elusive. Here, we use dense electroencephalography (EEG)…

Neurons and Cognition · Quantitative Biology 2017-06-05 Ahmad Mheich , Mahmoud Hassan , Fabrice Wendling

Evolving multiplex networks are a powerful model for representing the dynamics along time of different phenomena, such as social networks, power grids, biological pathways. However, exploring the structure of the multiplex network time…

Physics and Society · Physics 2016-01-11 Giuseppe Jurman

Networks of the brain are composed of a very large number of neurons connected through a random graph and interacting after random delays that both depend on the anatomical distance between cells. In order to comprehend the role of these…

Mathematical Physics · Physics 2014-05-16 Cristobal Quininao , Jonathan Touboul

Randomly connected neural networks have long served as a theoretical tool for studying collective dynamics in neural populations, yet quantitative comparisons to experiments remain limited. Recent technological advances have made it…

Neurons and Cognition · Quantitative Biology 2026-05-27 Zehui Zhao , Michael J Pasek , Ilya M Nemenman

Recent studies of networks representing complex systems from the brain to social graphs have revealed their higher-order architecture, which can be described by aggregates of simplexes (triangles, tetrahedrons, and higher cliques). Current…

Soft Condensed Matter · Physics 2026-03-11 Bosiljka Tadic , Neelima Gupte

Modeling human trajectories in crowded environments is challenging due to the complex nature of pedestrian behavior and interactions. This paper proposes a geometric graph neural network (GNN) architecture that integrates domain knowledge…

Machine Learning · Computer Science 2024-10-24 Sara Honarvar , Yancy Diaz-Mercado

Network-structured data becomes ubiquitous in daily life and is growing at a rapid pace. It presents great challenges to feature engineering due to the high non-linearity and sparsity of the data. The local and global structure of the…

Machine Learning · Computer Science 2025-01-31 Xin Sun , Zenghui Song , Yongbo Yu , Junyu Dong , Claudia Plant , Christian Boehm

Reducing dimension redundancy to find simplifying patterns in high-dimensional datasets and complex networks has become a major endeavor in many scientific fields. However, detecting the dimensionality of their latent space is challenging…

Physics and Society · Physics 2022-11-09 Pedro Almagro , Marian Boguna , M. Angeles Serrano

Functional networks provide a topological description of activity patterns in the brain, as they stem from the propagation of neural activity on the underlying anatomical or structural network of synaptic connections. This latter is well…

Disordered Systems and Neural Networks · Physics 2021-02-11 Ali Safari , Paolo Moretti , Ibai Diez , Jesus M. Cortes , Miguel Ángel Muñoz

High-throughput methods for yielding the set of connections in a neural system, the connectome, are now being developed. This tutorial describes ways to analyze the topological and spatial organization of the connectome at the macroscopic…

Neurons and Cognition · Quantitative Biology 2011-12-23 Marcus Kaiser

Cognition is not passive data accumulation but the active resolution of uncertainty through symmetry breaking. This paper argues that both cognitive evolution and development unfold via sequential symmetry-breaking transitions that disrupt…

Neurons and Cognition · Quantitative Biology 2025-06-13 Xin Li