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We suggest an enhancement to structural coding through the use of (a) causally bound codes, (b) basic constructs of graph theory and (c) statistics. As is the norm with structural coding, the codes are collected into categories. The…

Digital Libraries · Computer Science 2021-07-30 Etienne-Victor Depasquale , Humaira Abdul Salam , Franco Davoli

The rapid expansion of publicly-available medical data presents a challenge for clinicians and researchers alike, increasing the gap between the volume of scientific literature and its applications. The steady growth of studies and findings…

Artificial Intelligence · Computer Science 2025-08-06 Taine J. Elliott , Stephen P. Levitt , Ken Nixon , Martin Bekker

Knowledge Graphs (KGs) are increasingly used to represent and explore complex, interconnected data across diverse domains. However, existing KG visualization systems remain limited because they fail to provide the context of user questions.…

Human-Computer Interaction · Computer Science 2026-04-14 Rumali Perera , Xiaoqi Wang , Han-wei Shen

Clinical notes are an efficient way to record patient information but are notoriously hard to decipher for non-experts. Automatically simplifying medical text can empower patients with valuable information about their health, while saving…

Structured Visual Content (SVC) such as graphs, flow charts, or the like are used by authors to illustrate various concepts. While such depictions allow the average reader to better understand the contents, images containing SVCs are…

Computer Vision and Pattern Recognition · Computer Science 2022-05-02 Lukas Scholch , Jonas Steinhauser , Maximilian Beichter , Constantin Seibold , Kailun Yang , Merlin Knäble , Thorsten Schwarz , Alexander Mädche , Rainer Stiefelhagen

[Context] Modern AI applications increasingly process highly structured data, such as 3D meshes and point clouds, where test input generation must preserve both structural and semantic validity. However, existing fuzzing tools and input…

Software Engineering · Computer Science 2025-07-30 Zhaorui Yang , Yuxin Qiu , Haichao Zhu , Qian Zhang

Knowledge graphs (KGs) are important products of the semantic web, which are widely used in various application domains. Healthcare is one of such domains where KGs are intensively used, due to the high requirement for knowledge accuracy…

Artificial Intelligence · Computer Science 2025-07-31 Yuzhang Xie , Xu Han , Ran Xu , Xiao Hu , Jiaying Lu , Carl Yang

Clinical Text Notes (CTNs) contain physicians' reasoning process, written in an unstructured free text format, as they examine and interview patients. In recent years, several studies have been published that provide evidence for the…

Computation and Language · Computer Science 2022-08-19 Hlynur D. Hlynsson , Steindór Ellertsson , Jón F. Daðason , Emil L. Sigurdsson , Hrafn Loftsson

With the increasing number of CT scan examinations, there is a need for automated methods such as organ segmentation, anomaly detection and report generation to assist radiologists in managing their increasing workload. Multi-label…

Computer Vision and Pattern Recognition · Computer Science 2025-08-05 Theo Di Piazza , Carole Lazarus , Olivier Nempont , Loic Boussel

Medical deep learning models depend heavily on domain-specific knowledge to perform well on knowledge-intensive clinical tasks. Prior work has primarily leveraged unimodal knowledge graphs, such as the Unified Medical Language System…

Artificial Intelligence · Computer Science 2025-05-26 Xiaochen Wang , Yuan Zhong , Lingwei Zhang , Lisong Dai , Ting Wang , Fenglong Ma

This paper highlights the growing importance of information retrieval (IR) engines in the scientific community, addressing the inefficiency of traditional keyword-based search engines due to the rising volume of publications. The proposed…

Information Retrieval · Computer Science 2024-10-24 Mahsa Shamsabadi , Jennifer D'Souza

Clinical practice guidelines are long, multimodal documents whose branching recommendations are difficult to convert into executable clinical decision support (CDS), and one-shot parsing often breaks cross-page continuity. Recent LLM/VLM…

Computer Vision and Pattern Recognition · Computer Science 2026-04-06 Onur Selim Kilic , Yeti Z. Gurbuz , Cem O. Yaldiz , Afra Nawar , Etrit Haxholli , Ogul Can , Eli Waxman

Structured text understanding on Visually Rich Documents (VRDs) is a crucial part of Document Intelligence. Due to the complexity of content and layout in VRDs, structured text understanding has been a challenging task. Most existing…

Computer Vision and Pattern Recognition · Computer Science 2021-11-09 Yulin Li , Yuxi Qian , Yuchen Yu , Xiameng Qin , Chengquan Zhang , Yan Liu , Kun Yao , Junyu Han , Jingtuo Liu , Errui Ding

Knowledge graph completion (KGC) aims to predict missing facts in knowledge graphs (KGs), which is crucial as modern KGs remain largely incomplete. While training KGC models on multiple aligned KGs can improve performance, previous methods…

Computation and Language · Computer Science 2023-12-19 Wei Tang , Zhiqian Wu , Yixin Cao , Yong Liao , Pengyuan Zhou

Text simplification is one of the domains in Natural Language Processing (NLP) that offers an opportunity to understand the text in a simplified manner for exploration. However, it is always hard to understand and retrieve knowledge from…

Computation and Language · Computer Science 2023-04-18 Muhammad Salman , Armin Haller , Sergio J. Rodríguez Méndez

In this paper, we address the challenges of managing Standard Operating Procedures (SOPs), which often suffer from inconsistencies in language, format, and execution, leading to operational inefficiencies. Traditional process modeling…

Software Engineering · Computer Science 2025-04-02 Deepeka Garg , Sihan Zeng , Sumitra Ganesh , Leo Ardon

Following the global COVID-19 pandemic, the number of scientific papers studying the virus has grown massively, leading to increased interest in automated literate review. We present a clinical text mining system that improves on previous…

Computation and Language · Computer Science 2020-12-09 Veysel Kocaman , David Talby

Effective code documentation is essential for collaboration, comprehension, and long-term software maintainability, yet developers often neglect it due to its repetitive nature. Automated documentation generation has evolved from heuristic…

Software Engineering · Computer Science 2026-02-10 Mojtaba Mostafavi Ghahfarokhi , Hamed Jahantigh , Alireza Asadi , Abbas Heydarnoori

Visual question answering (VQA) in medical imaging aims to support clinical diagnosis by automatically interpreting complex imaging data in response to natural language queries. Existing studies typically rely on distinct visual and textual…

Computer Vision and Pattern Recognition · Computer Science 2025-07-08 Yuanhe Tian , Chen Su , Junwen Duan , Yan Song

Automated international classification of diseases (ICD) coding aims to assign multiple disease codes to clinical documents and plays a critical role in healthcare informatics. However, its performance is hindered by the extreme long-tail…

Machine Learning · Computer Science 2026-01-13 Tianlei Chen , Yuxiao Chen , Yang Li , Feifei Wang
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