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In this work, which is done in the context of a (moded) logic programming language, we devise a data-flow analysis dedicated to computing what we call argument profiles. Such a profile essentially describes, for each argument of a…

Logic in Computer Science · Computer Science 2023-08-31 Gonzague Yernaux , Wim Vanhoof

Many applications, ranging from natural to social sciences, rely on graphlet analysis for the intuitive and meaningful characterization of networks employing micro-level structures as building blocks. However, it has not been thoroughly…

Social and Information Networks · Computer Science 2023-06-06 Colin Cleveland , Chin-Yen Lee , Shen-Fu Tsai , Wei-Hsuan Yu , Hsuan-Wei Lee

PhyloFrame is a Python library for phylogenetic computation targeting the gap between specialist, compiler-optimized operations and flexible, script-based workflows -- with emphasis on fast, memory-efficient operations for very large tree…

Populations and Evolution · Quantitative Biology 2026-05-28 Matthew Andres Moreno , Jeet Sukumaran , Luis Zaman , Emily Dolson

Python libraries often need to maintain a stable public API even as internal implementations evolve, gain new backends, or depend on heavy optional libraries. In Python, where internal objects are easy to inspect and import, users can come…

Software Engineering · Computer Science 2026-02-04 Antonios Saravanos , John Pazarzis , Stavros Zervoudakis , Dongnanzi Zheng

In these lecture notes, a selection of frequently required statistical tools will be introduced and illustrated. They allow to post-process data that stem from, e.g., large-scale numerical simulations (aka sequence of random experiments).…

Data Analysis, Statistics and Probability · Physics 2012-07-26 O. Melchert

Many research directions in machine learning, particularly in deep learning, involve complex, multi-stage experiments, commonly involving state-mutating operations acting on models along multiple paths of execution. Although machine…

Software Engineering · Computer Science 2020-06-16 Michela Paganini , Jessica Zosa Forde

Retrieval models are key components of Retrieval-Augmented Generation (RAG) systems, which generate search queries, process the documents returned, and generate a response. RAG systems are often dynamic and may involve multiple rounds of…

Information Retrieval · Computer Science 2026-01-16 Eugene Yang , Andrew Yates , Dawn Lawrie , James Mayfield , Trevor Adriaanse

We introduce a Python framework designed to automate the most common tasks associated with the extraction and upscaling of the statistics of single-impact crater functions to inform coefficients of continuum equations describing surface…

Computational Physics · Physics 2014-10-31 Scott A. Norris

Graphs are now ubiquitous in almost every field of research. Recently, new research areas devoted to the analysis of graphs and data associated to their vertices have emerged. Focusing on dynamical processes, we propose a fast, robust and…

Social and Information Networks · Computer Science 2016-02-02 Kirell Benzi , Benjamin Ricaud , Pierre Vandergheynst

Radio astronomy observatories with high throughput back end instruments require real-time data processing. While computing hardware continues to advance rapidly, development of real-time processing pipelines remains difficult and…

Ensuring the reproducibility of scientific work is crucial as it allows the consistent verification of scientific claims and facilitates the advancement of knowledge by providing a reliable foundation for future research. However,…

Software Engineering · Computer Science 2025-04-14 Lázaro Costa , Susana Barbosa , Jácome Cunha

Recent advances in graph learning have paved the way for innovative retrieval-augmented generation (RAG) systems that leverage the inherent relational structures in graph data. However, many existing approaches suffer from rigid, fixed…

Information Retrieval · Computer Science 2025-03-26 Yuan Li , Jun Hu , Jiaxin Jiang , Zemin Liu , Bryan Hooi , Bingsheng He

Call graphs play an important role in different contexts, such as profiling and vulnerability propagation analysis. Generating call graphs in an efficient manner can be a challenging task when it comes to high-level languages that are…

Programming Languages · Computer Science 2021-03-02 Vitalis Salis , Thodoris Sotiropoulos , Panos Louridas , Diomidis Spinellis , Dimitris Mitropoulos

Misconceptions about program execution hinder many novice programmers. We introduce SimpliPy, a notional machine designed around a carefully chosen Python subset to clarify core control flow and scoping concepts. Its foundation is a precise…

Programming Languages · Computer Science 2025-10-21 Moida Praneeth Jain , Venkatesh Choppella

GAMMA_FLOW is an open-source Python package for real-time analysis of spectral data. It supports classification, denoising, decomposition, and outlier detection of both single- and multi-component spectra. Instead of relying on large,…

Machine Learning · Computer Science 2025-11-13 Viola Rädle , Tilman Hartwig , Benjamin Oesen , Emily Alice Kröger , Julius Vogt , Eike Gericke , Martin Baron

Document parsing (DP) transforms unstructured or semi-structured documents into structured, machine-readable representations, enabling downstream applications such as knowledge base construction and retrieval-augmented generation (RAG).…

Python has become the prime language for application development in the Data Science and Machine Learning domains. However, data scientists are not necessarily experienced programmers. While Python lets them quickly implement their…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-08-24 Oscar Castro , Pierrick Bruneau , Jean-Sébastien Sottet , Dario Torregrossa

Pattern matching is a powerful tool for symbolic computations. Applications include term rewriting systems, as well as the manipulation of symbolic expressions, abstract syntax trees, and XML and JSON data. It also allows for an intuitive…

Programming Languages · Computer Science 2017-10-09 Manuel Krebber , Henrik Barthels , Paolo Bientinesi

Graph mining workloads aim to extract structural properties of a graph by exploring its subgraph structures. General purpose graph mining systems provide a generic runtime to explore subgraph structures of interest with the help of…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-04-07 Kasra Jamshidi , Rakesh Mahadasa , Keval Vora

Data analysis in fundamental sciences nowadays is an essential process that pushes frontiers of our knowledge and leads to new discoveries. At the same time we can see that complexity of those analyses increases fast due to a)~enormous…

Data Analysis, Statistics and Probability · Physics 2016-01-20 Tatiana Likhomanenko , Alex Rogozhnikov , Alexander Baranov , Egor Khairullin , Andrey Ustyuzhanin