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Acquiring plausible pathways on high-dimensional structural distributions is beneficial in several domains. For example, in the drug discovery field, a protein conformational pathway, i.e. a highly probable sequence of protein structural…

Quantitative Methods · Quantitative Biology 2025-06-04 Ziyad Oulhaj , Yoshiyuki Ishii , Kento Ohga , Kimihiro Yamazaki , Mutsuyo Wada , Yuhei Umeda , Takashi Kato , Yuichiro Wada , Hiroaki Kurihara

With the rise of the open data movement a lot of statistical data has been made publicly available by governments, statistical offices and other organizations. First efforts to visualize are made by the data providers themselves. Data…

Human-Computer Interaction · Computer Science 2011-10-17 Daniel Hienert , Benjamin Zapilko , Philipp Schaer , Brigitte Mathiak

Graphs, consisting of vertices and edges, are vital for representing complex relationships in fields like social networks, finance, and blockchain. Visualizing these graphs helps analysts identify structural patterns, with readability…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-11-18 Sanggeon Yun

The efficient management and planning of urban energy systems require integrated three-dimensional (3D) models that accurately represent both consumption nodes and distribution networks. This paper introduces our developed approach and…

Digital Libraries · Computer Science 2026-03-24 Shiliang Zhang , Sabita Maharjan

We present an open-source interface for scientists to explore Twitter data through interactive network visualizations. Combining data collection, transformation and visualization in one easily accessible framework, the twitter explorer…

Social and Information Networks · Computer Science 2021-04-08 Armin Pournaki , Felix Gaisbauer , Sven Banisch , Eckehard Olbrich

In complex multivariate data sets, different features usually include diverse associations with different variables, and different variables are associated within different regions. Therefore, exploring the associations between variables…

Computer Vision and Pattern Recognition · Computer Science 2019-08-20 Xiangyang He , Yubo Tao , Qirui Wang , Hai Lin

In this study we want to connect our previously proposed context-relevant topographical maps with the deep learning community. Our architecture is a classifier with hidden layers that are hierarchical two-dimensional topographical maps.…

Neural and Evolutionary Computing · Computer Science 2015-04-06 Thomas Trappenberg , Paul Hollensen , Pitoyo Hartono

Effective scene representation is critical for the visual grounding ability of representations, yet existing methods for 3D Visual Grounding are often constrained. They either only focus on geometric and visual cues, or, like traditional 3D…

Computer Vision and Pattern Recognition · Computer Science 2025-10-15 Qinghongbing Xie , Zijian Liang , Fuhao Li , Long Zeng

Software libraries for Topological Data Analysis (TDA) offer limited support for interactive visualization. Most libraries only allow to visualize topological descriptors (e.g., persistence diagrams), and lose the connection with the…

Graphics · Computer Science 2022-04-22 Xueyi Bao , Guoxi Liu , Federico Iuricich

Sustainable roofs, such as those with greenery and photovoltaic panels, contribute to the roadmap for reducing the carbon footprint of cities. However, research on sustainable urban roofscapes is rather focused on their potential and it is…

Computers and Society · Computer Science 2021-06-25 Abraham Noah Wu , Filip Biljecki

This paper describes GeoPl@ntNet, an interactive web application designed to make Essential Biodiversity Variables accessible and understandable to everyone through dynamic maps and fact sheets. Its core purpose is to allow users to explore…

Quantitative Methods · Quantitative Biology 2026-04-15 Lukas Picek , César Leblanc , Alexis Joly , Pierre Bonnet , Rémi Palard , Maximilien Servajean

With the increasing availability of mobility-related data, such as GPS-traces, Web queries and climate conditions, there is a growing demand to utilize this data to better understand and support urban mobility needs. However, data available…

Summary: heatmaply is an R package for easily creating interactive cluster heatmaps that can be shared online as a stand-alone HTML file. Interactivity includes a tooltip display of values when hovering over cells, as well as the ability to…

Quantitative Methods · Quantitative Biology 2019-11-07 Tal Galili , Alan OCallaghan , Jonathan Sidi , Carson Sievert

Maps are fundamental medium to visualize and represent the real word in a simple and 16 philosophical way. The emergence of the 3rd wave information has made a proportion of maps are available to be generated ubiquitously, which would…

Computer Vision and Pattern Recognition · Computer Science 2023-12-15 Xiran Zhou , Yi Wen , Honghao Li , Kaiyuan Li , Zhenfeng Shao , Zhigang Yan , Xiao Xie

Tactile maps are commonly used to give visually impaired users access to geographical representations. Although those relief maps are efficient tools for acquisition of spatial knowledge, they present several limitations and issues such as…

Human-Computer Interaction · Computer Science 2022-09-01 Julie Ducasse , Anke Brock , Christophe Jouffrais

Presenting long sequences of dynamic graphs remains challenging due to the underlying large-scale and high-dimensional data. We propose dg2pix, a novel pixel-based visualization technique, to visually explore temporal and structural…

Human-Computer Interaction · Computer Science 2020-09-17 Eren Cakmak , Dominik Jäckle , Tobias Schreck , Daniel Keim

The digital transformation of work presents new opportunities to understand how informal workgroups organize around the dynamic needs of organizations, potentially in contrast to the formal, static, and idealized hierarchies depicted by org…

The appearance of the world varies dramatically not only from place to place but also from hour to hour and month to month. Every day billions of images capture this complex relationship, many of which are associated with precise time and…

Computer Vision and Pattern Recognition · Computer Science 2021-01-01 Tawfiq Salem , Scott Workman , Nathan Jacobs

Data clustering is a common unsupervised learning method frequently used in exploratory data analysis. However, identifying relevant structures in unlabeled, high-dimensional data is nontrivial, requiring iterative experimentation with…

Human-Computer Interaction · Computer Science 2018-11-29 Marco Cavallo , Çağatay Demiralp

Network theory provides various tools for investigating the structural or functional topology of many complex systems found in nature, technology and society. Nevertheless, it has recently been realised that a considerable number of systems…

Data Analysis, Statistics and Probability · Physics 2012-03-23 Jonathan F. Donges , Hanna C. H. Schultz , Norbert Marwan , Yong Zou , Juergen Kurths