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Accurate models are essential for design, performance prediction, control, and diagnostics in complex engineering systems. Physics-based models excel during the design phase but often become outdated during system deployment due to changing…

Machine Learning · Computer Science 2025-01-22 Zihan Liu , Prashant N. Kambali , C. Nataraj

We introduce a robust framework for learning various generalized Hamiltonian dynamics from noisy, sparse phase-space data and in an unsupervised manner based on variational Bayesian inference. Although conservative, dissipative, and…

Machine Learning · Computer Science 2025-09-10 Luke McLennan , Yi Wang , Ryan Farell , Minh Nguyen , Chandrajit Bajaj

Hidden Markov Models (HMMs) comprise a powerful generative approach for modeling sequential data and time-series in general. However, the commonly employed assumption of the dependence of the current time frame to a single or multiple…

Machine Learning · Computer Science 2021-09-13 Konstantinos P. Panousis , Sotirios Chatzis , Sergios Theodoridis

In developing data-driven modeling methodologies, there is an ongoing need to reconcile the strong predictive performance of opaque black-box models with the transparency required for critical applications. This work introduces an…

Machine Learning · Statistics 2026-05-21 Xin Huang , Jia Li , Jun Yu

We report the results of a numerical study of nonequilibrium steady states for a class of Hamiltonian models. In these models of coupled matter-energy transport, particles exchange energy through collisions with pinned-down rotating disks.…

Statistical Mechanics · Physics 2015-05-18 Kevin K. Lin , Lai-Sang Young

In molecular dynamics simulations, dynamically consistent coarse-grained (CG) models commonly use stochastic thermostats to model friction and fluctuations that are lost in a CG description. While Markovian, i.e., time-local, formulations…

Statistical Mechanics · Physics 2024-06-24 V. Klippenstein , N. Wolf , N. F. A. van der Vegt

Sequence models face a fundamental tradeoff between memory capacity and computational efficiency. Transformers achieve expressive context modeling at quadratic cost, while linear attention and state-space models run in linear time by…

Machine Learning · Computer Science 2026-05-11 Yaxita Amin , Helen Zichen Li , Mengfan Zhang , Samet Ayhan

Probabilistic generative models based on measure transport, such as diffusion and flow-based models, are often formulated in the language of Markovian stochastic dynamics, where the choice of the underlying process impacts both algorithmic…

Machine Learning · Computer Science 2026-04-06 Yinuo Ren , Grant M. Rotskoff , Lexing Ying

Recent works have shown that generic local Hamiltonians can be efficiently inferred from local measurements performed on their eigenstates or thermal states. Realistic quantum systems are often affected by dissipation and decoherence due to…

Quantum Physics · Physics 2020-03-25 Eyal Bairey , Chu Guo , Dario Poletti , Netanel H. Lindner , Itai Arad

Exploring the intersection of deterministic and stochastic dynamics, this paper delves into Lagrangian discovery for conservative and non-conservative systems under stochastic excitation. Traditional Lagrangian frameworks, adept at…

Dynamical Systems · Mathematics 2024-02-28 Tapas Tripura , Satyam Panda , Budhaditya Hazra , Souvik Chakraborty

Lattice Hamiltonian systems underpin models across condensed matter, nonlinear optics, and biophysics, yet learning their dynamics from data is obstructed by two unknowns: the interaction topology and whether node dynamics are homogeneous.…

Machine Learning · Computer Science 2026-04-28 Ru Geng , Panayotis Kevrekidis , Yixian Gao , Hong-Kun Zhang , Jian Zu

Recent studies have proposed that one can summarize brain activity into dynamics among a relatively small number of hidden states and that such an approach is a promising tool for revealing brain function. Hidden Markov models (HMMs) are a…

Neurons and Cognition · Quantitative Biology 2021-09-02 Takahiro Ezaki , Yu Himeno , Takamitsu Watanabe , Naoki Masuda

Reconstructing the KAM dynamics diagram of Hamiltonian system from the time series of a limited number of parameters is an outstanding question in nonlinear science, especially when the Hamiltonian governing the system dynamics are unknown.…

Signal Processing · Electrical Eng. & Systems 2021-08-11 Han Zhang , Huawei Fan , Liang Wang , Xingang Wang

A theoretical framework which unifies the conventional Mori-Zwanzig formalism and the approximate Koopman learning is presented. In this framework, the Mori-Zwanzig formalism, developed in statistical mechanics to tackle the hard problem of…

Statistical Mechanics · Physics 2021-07-27 Yen Ting Lin , Yifeng Tian , Marian Anghel , Daniel Livescu

The identification of a nonlinear dynamic model is an open topic in control theory, especially from sparse input-output measurements. A fundamental challenge of this problem is that very few to zero prior knowledge is available on both the…

Systems and Control · Electrical Eng. & Systems 2022-06-13 Steeven Janny , Quentin Possamai , Laurent Bako , Madiha Nadri , Christian Wolf

We provide a fully nonlinear port-Hamiltonian formulation for discrete elastodynamical systems as well as a structure-preserving time discretization. The governing equations are obtained in a variational manner and represent index-1…

Dynamical Systems · Mathematics 2025-06-23 Philipp L. Kinon , Tobias Thoma , Peter Betsch , Paul Kotyczka

Far-from-equilibrium phenomena are critical to all natural and engineered systems, and essential to biological processes responsible for life. For over a century and a half, since Carnot, Clausius, Maxwell, Boltzmann, and Gibbs, among many…

Statistical Mechanics · Physics 2023-09-14 Travis Leadbetter , Prashant K. Purohit , Celia Reina

For a quantum system undergoing non-Markovian open quantum dynamics, we demonstrate a tomography algorithm based on multi-time measurements of the system, which reconstructs a minimal environment coupled to the system, such that the system…

Quantum Physics · Physics 2022-08-31 Chu Guo

Active matter, as other types of self-organizing systems, relies on the take-up of energy that can be used for different actions, such as active motion or structure formation. Here we provide an agent-based framework to model these…

Soft Condensed Matter · Physics 2018-12-26 Frank Schweitzer

Motivated by disease progression-related studies, we propose an estimation method for fitting general non-homogeneous multi-state Markov models. The proposal can handle many types of multi-state processes, with several states and various…

Methodology · Statistics 2024-07-22 Alessia Eletti , Giampiero Marra , Rosalba Radice