English
Related papers

Related papers: The Protocol Genome A Self Supervised Learning Fra…

200 papers

In this work, we propose an ensemble of classifiers to distinguish between various degrees of abnormalities of the heart using Phonocardiogram (PCG) signals acquired using digital stethoscopes in a clinical setting, for the INTERSPEECH 2018…

Computer Vision and Pattern Recognition · Computer Science 2019-04-30 Ahmed Imtiaz Humayun , Md. Tauhiduzzaman Khan , Shabnam Ghaffarzadegan , Zhe Feng , Taufiq Hasan

One of the most noticeable trends in healthcare over the last years is the continuous growth of data volume produced and its heterogeneity. In the medical imaging field, the evolution of digital systems is supported by the PACS concept and…

Software Engineering · Computer Science 2021-01-05 Rui Lebre , Eduardo Pinho , Jorge Miguel Silva , Carlos Costa

Foundation models succeed when they learn in the native structure of a modality, whether morphology-respecting tokens in language or pixels in vision. Wireless packet traces deserve the same treatment: meaning emerges from layered headers,…

Machine Learning · Computer Science 2026-03-17 Swadhin Pradhan , Shazal Irshad , Jerome Henry

As the number of heterogenous IP-connected devices and traffic volume increase, so does the potential for security breaches. The undetected exploitation of these breaches can bring severe cybersecurity and privacy risks. Anomaly-based…

Machine Learning · Computer Science 2022-12-15 Willian T. Lunardi , Martin Andreoni Lopez , Jean-Pierre Giacalone

Quantifying sarcomere structure organization in human-induced pluripotent stem cell-derived cardiomyocytes (hiPSC-CMs) is crucial for understanding cardiac disease pathology, improving drug screening, and advancing regenerative medicine.…

Computer Vision and Pattern Recognition · Computer Science 2024-10-29 Huyen Le , Khiet Dang , Tien Lai , Nhung Nguyen , Mai Tran , Hieu Pham

Contrastive learning methods in self-supervised settings have primarily focused on pre-training encoders, while decoders are typically introduced and trained separately for downstream dense prediction tasks. However, this conventional…

Computer Vision and Pattern Recognition · Computer Science 2026-03-05 Sébastien Quetin , Tapotosh Ghosh , Farhad Maleki

Unknown anomaly detection in medical imaging remains a fundamental challenge due to the scarcity of labeled anomalies and the high cost of expert supervision. We introduce an unsupervised, oracle-free framework that incrementally expands a…

Computer Vision and Pattern Recognition · Computer Science 2025-11-12 Nand Kumar Yadav , Rodrigue Rizk , William CW Chen , KC Santosh

Wearable Internet of Things (IoT) devices are gaining ground for continuous physiological data acquisition and health monitoring. These physiological signals can be used for security applications to achieve continuous authentication and…

Signal Processing · Electrical Eng. & Systems 2024-09-10 Guoxin Wang , Shreejith Shanker , Avishek Nag , Yong Lian , Deepu John

Each human genome is a 3 billion base pair set of encoding instructions. Decoding the genome using deep learning fundamentally differs from most tasks, as we do not know the full structure of the data and therefore cannot design…

Machine Learning · Computer Science 2016-05-24 Laura Deming , Sasha Targ , Nate Sauder , Diogo Almeida , Chun Jimmie Ye

Anomaly detection (such as telecom fraud detection and medical image detection) has attracted the increasing attention of people. The complex interaction between multiple entities widely exists in the network, which can reflect specific…

Machine Learning · Computer Science 2024-06-10 Xu Yuan , Na Zhou , Shuo Yu , Huafei Huang , Zhikui Chen , Feng Xia

Purpose: This study evaluates the effectiveness and impact of automated order-based protocol assignment for magnetic resonance imaging (MRI) exams using natural language processing (NLP) and deep learning (DL). Methods: NLP tools were…

Machine Learning · Computer Science 2021-06-17 Andrew S. Nencka , Mohammad Sherafati , Timothy Goebel , Parag Tolat , Kevin M. Koch

Previous deep learning efforts have focused on improving the performance of Pulmonary Embolism(PE) diagnosis from Computed Tomography (CT) scans using Convolutional Neural Networks (CNN). However, the features from CT scans alone are not…

Computer Vision and Pattern Recognition · Computer Science 2023-08-29 Santosh Sanjeev , Salwa K. Al Khatib , Mai A. Shaaban , Ibrahim Almakky , Vijay Ram Papineni , Mohammad Yaqub

While contrast-enhanced CT (CECT) is standard for assessing abdominal aortic aneurysms (AAA), the required iodinated contrast agents pose significant risks, including nephrotoxicity, patient allergies, and environmental harm. To reduce…

Computer Vision and Pattern Recognition · Computer Science 2025-12-08 Yuxuan Ou , Ning Bi , Jiazhen Pan , Jiancheng Yang , Boliang Yu , Usama Zidan , Regent Lee , Vicente Grau

To safely deploy deep learning models in the clinic, a quality assurance framework is needed for routine or continuous monitoring of input-domain shift and the models' performance without ground truth contours. In this work, cardiac…

Image and Video Processing · Electrical Eng. & Systems 2023-05-22 Xiyao Jin , Yao Hao , Jessica Hilliard , Zhehao Zhang , Maria A. Thomas , Hua Li , Abhinav K. Jha , Geoffrey D. Hugo

The human cerebral cortex has many bumps and grooves called gyri and sulci. Even though there is a high inter-individual consistency for the main cortical folds, this is not the case when we examine the exact shapes and details of the…

Machine Learning · Computer Science 2024-02-01 Aymeric Gaudin , Louise Guillon , Clara Fischer , Arnaud Cachia , Denis Rivière , Jean-François Mangin , Joël Chavas

Automatic labelling of anatomical structures, such as coronary arteries, is critical for diagnosis, yet existing (non-deep learning) methods are limited by a reliance on prior topological knowledge of the expected tree-like structures. As…

Image and Video Processing · Electrical Eng. & Systems 2024-03-05 Yadan Li , Mohammad Ali Armin , Simon Denman , David Ahmedt-Aristizabal

Prototype-based neural networks offer interpretable predictions by comparing inputs to learned, representative signal patterns anchored in training data. While such models have shown promise in the classification of physiological data, it…

Machine Learning · Computer Science 2026-05-28 Sahil Sethi , David Chen , Michael C. Burkhart , Nipun Bhandari , Bashar Ramadan , Brett Beaulieu-Jones

The electrocardiogram (ECG) is a key diagnostic tool in cardiovascular health. Single-lead ECG recording is integrated into both clinical-grade and consumer wearables. While self-supervised pretraining of foundation models on unlabeled ECGs…

Machine Learning · Computer Science 2025-12-03 Yuxuan Shu , Peter H. Charlton , Fahim Kawsar , Jussi Hernesniemi , Mohammad Malekzadeh

We introduce a novel, all-in-one deep learning framework for MR image reconstruction, enabling a single model to enhance image quality across multiple aspects of k-space sampling and to be effective across a wide range of clinical and…

Image and Video Processing · Electrical Eng. & Systems 2024-05-28 Geunu Jeong , Hyeonsoo Kim , Joonyoung Yang , Kyungeun Jang , Jeewook Kim

Learning Electronic Health Records (EHRs) representation is a preeminent yet under-discovered research topic. It benefits various clinical decision support applications, e.g., medication outcome prediction or patient similarity search.…

Machine Learning · Computer Science 2024-02-22 Hao-Ren Yao , Nairen Cao , Katina Russell , Der-Chen Chang , Ophir Frieder , Jeremy Fineman