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Related papers: Phyllotaxis in a Keller-Segel model

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Three-dimensional cultures of cells are gaining popularity as an in vitro improvement over 2D Petri dishes. In many such experiments, cells have been found to organize in aggregates. We present new results of three-dimensional in vitro…

Cell Behavior · Quantitative Biology 2018-11-01 Federica Bubba , Camille Pouchol , Nathalie Ferrand , Guillaume Vidal , Luis Almeida , Benoıt Perthame , Michèle Sabbah

Spirals are common in Nature: the snail's shell and the ordering of seeds in the sunflower are amongst the most widely-known occurrences. While these are static, dynamic spirals can also be observed in excitable systems such as heart…

Dynamical Systems · Mathematics 2007-05-23 Patrick Boily

Collective motion of chemotactic bacteria as E. Coli relies, at the individual level, on a continuous reorientation by runs and tumbles. It has been established that the length of run is decided by a stiff response to a temporal sensingof…

Analysis of PDEs · Mathematics 2018-08-15 Benoît Perthame , Shugo Yasuda

The shape of the cross section of a dense fiber bundle is related to the symmetry of its molecular packing. However, this statement might be belied by type I collagen fibrils which have a rounded section of high symmetry while structural…

Soft Condensed Matter · Physics 2013-03-22 Jean Charvolin , Jean-François Sadoc

Jean's `Fundamental Theorem of Phyllotaxis' (\emph{Phyllotaxis: a systematic study in Plant Morphogenesis}, CUP 1994) describes the relationship between the count numbers of observed spirals in cylindrical lattices and the horizontal angle…

Tissues and Organs · Quantitative Biology 2024-07-10 Jonathan Swinton

We argue that self-excited instabilities are the cause of spiral patterns in simulations of unperturbed stellar discs. In previous papers, we have found that spiral patterns were caused by a few concurrent waves, which we claimed were…

Astrophysics of Galaxies · Physics 2019-08-14 J. A. Sellwood , Ray G. Carlberg

We investigate nonlinear dynamics near an unstable constant equilibrium in the classical Keller-Segel model. Given any general perturbation of magnitude $\delta$, we prove that its nonlinear evolution is dominated by the corresponding…

Analysis of PDEs · Mathematics 2007-05-23 Yan Guo , Hyung Ju Hwang

The appearance of mathematical regularities in the disposition of leaves on a stem, scales on a pine-cone and spines on a cactus has puzzled scholars for millennia; similar so-called phyllotactic patterns are seen in self-organized growth,…

Soft Condensed Matter · Physics 2015-05-18 Cristiano Nisoli , Nathaniel M. Gabor , Paul E. Lammert , J. D. Maynard , Vincent H. Crespi

A novel, protean, topological soliton has recently been shown to emerge in systems of repulsive particles in cylindrical geometries, whose statics is described by the number-theoretical objects of phyllotaxis. Here we present a minimal and…

Soft Condensed Matter · Physics 2015-05-13 Cristiano Nisoli

The flux limited Keller-Segel (FLKS) system is a macroscopic model describing bacteria motion by chemotaxis which takes into account saturation of the velocity. The hyper-bolic form and some special parabolic forms have been derived from…

Analysis of PDEs · Mathematics 2018-01-23 Benoît Perthame , Nicolas Vauchelet , Zhian Wang

This paper deals with the analysis of qualitative properties involved in the dynamics of Keller-Segel type systems in which the diffusion mechanisms of the cells are driven by porous-media flux-saturated phenomena. We study the…

Analysis of PDEs · Mathematics 2018-10-18 Margarita Arias , Juan Campos , Juan Soler

This paper investigates the formation of time--periodic and stable patterns of a two--competing--species Keller--Segel chemotaxis model with a focus on the effect of cellular growth. We carry out rigorous Hopf bifurcation analysis to obtain…

Analysis of PDEs · Mathematics 2017-07-11 Qi Wang , Jingyue Yang , Lu Zhang

A novel trait-structured Keller-Segel model that explores the dynamics of a migrating cell population guided by chemotaxis in response to an external ligand concentration is derived and analysed. Unlike traditional Keller-Segel models, this…

Cell Behavior · Quantitative Biology 2025-02-27 Viktoria Freingruber , Tommaso Lorenzi , Kevin J. Painter , Mariya Ptashnyk

This paper investigates the Keller-Segel model with quadratic cellular diffusion over a disk in $\mathbb R^2$ with a focus on the formation of its nontrivial patterns. We obtain explicit formulas of radially symmetric stationary solutions…

Analysis of PDEs · Mathematics 2019-11-07 Lin Chen , Fanze Kong , Qi Wang

The phenomenon where cells with elongated protrusions, such as neurons, communicate by contacting other cells and arrange themselves appropriately is termed cell sorting through haptotaxis. This phenomenon is described by partial…

Analysis of PDEs · Mathematics 2026-01-01 Hiroshi Ishii , Hideki Murakawa , Yoshitaro Tanaka

Auto-chemotaxis, the directed movement of cells along gradients in chemicals they secrete, is central to the formation of complex spatiotemporal patterns in biological systems. Since the introduction of the Keller--Segel model, numerous…

Soft Condensed Matter · Physics 2025-11-18 Henrik Weyer , David Muramatsu , Erwin Frey

Chemotaxis plays a significant role in numerous physiological processes. The Keller-Segel equation serves as a mathematical model for simulating the phenomenon of cell population aggregation under chemotaxis, possessing physical properties…

Numerical Analysis · Mathematics 2025-02-24 Mingmei Chen , Kun Wang , Cong Xie

We analyze the existence, linear stability, and slow dynamics of localized 1D spike patterns for a Keller--Segel model of chemotaxis that includes the effect of logistic growth of the cellular population. Our analysis of localized patterns…

Analysis of PDEs · Mathematics 2023-08-01 Fanze Kong , Michael Ward , Juncheng Wei

We demonstrate that the pattern forming partial differential equation derived from the auxin distribution model proposed by Meyerowitz, Traas and others gives rise to all spiral phyllotaxis properties observed on plants. We show how the…

Analysis of PDEs · Mathematics 2015-06-12 Matthew Pennybacker , Alan C. Newell

Gaseous substructures such as feathers and spurs dot the landscape of spiral arms in disc galaxies. One of the candidates to explain their formation is the wiggle instability of galactic spiral shocks. We study the wiggle instability using…

Astrophysics of Galaxies · Physics 2022-06-01 Yash Mandowara , Mattia C. Sormani , Emanuele Sobacchi , Ralf S. Klessen