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Background: Breakup reactions are often used to probe the nuclear structure of halo nuclei. The eikonal model diverges for Coulomb breakup since it relies on the adiabatic approximation. To correct this weakness, a Coulomb-corrected eikonal…

Nuclear Theory · Physics 2020-06-24 Chloë Hebborn , Daniel Baye

In the integrative analyses of omics data, it is often of interest to extract data representation from one data type that best reflect its relations with another data type. This task is traditionally fulfilled by linear methods such as…

Applications · Statistics 2021-03-30 Tianwei Yu

While analytical solutions of critical (phase) transitions in physical systems are abundant for simple nonlinear systems, such analysis remains intractable for real-life dynamical systems. A key example of such a physical system is…

Identifying local structural motifs and packing patterns of molecular solids is a challenging task for both simulation and experiment. We demonstrate two novel approaches to characterize local environments in different polymorphs of…

Materials Science · Physics 2024-04-02 Daisuke Kuroshima , Michael Kilgour , Mark E. Tuckerman , Jutta Rogal

The introduction of femto-chemistry has made it a primary goal to follow the nuclear and electronic evolution of a molecule in time and space as it undergoes a chemical reaction. Using Coulomb Explosion Imaging we have shot the first…

Colloidoscope is a deep learning pipeline employing a 3D residual Unet architecture, designed to enhance the tracking of dense colloidal suspensions through confocal microscopy. This methodology uses a simulated training dataset that…

AtomAI is an open-source software package bridging instrument-specific Python libraries, deep learning, and simulation tools into a single ecosystem. AtomAI allows direct applications of the deep convolutional neural networks for atomic and…

Data Analysis, Statistics and Probability · Physics 2022-12-29 Maxim Ziatdinov , Ayana Ghosh , Tommy Wong , Sergei V. Kalinin

Turbulence is characterised by chaotic dynamics and a high-dimensional state space, which make this phenomenon challenging to predict. However, turbulent flows are often characterised by coherent spatiotemporal structures, such as vortices…

Fluid Dynamics · Physics 2023-06-21 Nguyen Anh Khoa Doan , Alberto Racca , Luca Magri

Low-energy electrons (LEEs) are known to be effective in causing strand breaks in DNA. Recent experiments show that an important direct source of LEEs is the intermolecular Coulombic decay (ICD) process. Here we propose a new cascade…

Atomic and Molecular Clusters · Physics 2014-02-14 Kirill Gokhberg , Premysl Kolorenc , Alexander I. Kuleff , Lorenz S. Cederbaum

Electron-impact ionization cross sections of atoms and molecules are essential for plasma modelling. However, experimentally determining the absolute cross sections is not easy, and ab initio calculations become computationally prohibitive…

Plasma Physics · Physics 2024-10-10 Yifan Wang , Linlin Zhong

We present SCULPT (Supervised Clustering and Uncovering Latent Patterns with Training), a comprehensive software platform for analyzing tabulated high-dimensional multi-particle coincidence data from Cold Target Recoil Ion Momentum…

Atomic and Molecular Clusters · Physics 2026-05-20 Hazem Daoud , Sarvesh Kumar , Jin Qian , Tanny Chavez , Daniel Slaughter , Thorsten Weber

We solve the orientation recovery of a tumbling protein in the gas phase from single-event measurements of the spatial positions of its ions after an X-ray laser induced explosion. We simulate diffracted X-ray signal and ion dynamics under…

Chemical Physics · Physics 2026-03-26 Tomas André , Alfredo Bellisario , Nicusor Timneanu , Carl Caleman

The independent atom model - pixel counting method (IAM-PCM) for the description of ion-molecule collisions is reviewed. The method was introduced (in 2016) to improve on the simple additivity rule according to which scattering cross…

Atomic Physics · Physics 2025-09-10 Hans Juergen Luedde , Marko Horbatsch , Tom Kirchner

In the context of future electron-ion collision experiments, particularly the Electron-Ion Collider (EIC) and the Electron-Ion Collider in China (EicC), investigating exclusive photoproduction processes is of paramount importance. These…

High Energy Physics - Phenomenology · Physics 2024-10-10 Xin Wu , Xinbai Li , Zebo Tang , Kaiyang Wang , Wangmei Zha

Conventional deep learning models deal with images one-by-one, requiring costly and time-consuming expert labeling in the field of medical imaging, and domain-specific restriction limits model generalizability. Visual in-context learning…

We introduce Deep-CEE (Deep Learning for Galaxy Cluster Extraction and Evaluation), a proof of concept for a novel deep learning technique, applied directly to wide-field colour imaging to search for galaxy clusters, without the need for…

Astrophysics of Galaxies · Physics 2019-11-26 Matthew C. Chan , John P. Stott

Multiplex Imaging (MI) enables the simultaneous visualization of multiple biological markers in separate imaging channels at subcellular resolution, providing valuable insights into cell-type heterogeneity and spatial organization. However,…

Image and Video Processing · Electrical Eng. & Systems 2024-11-07 Simon Gutwein , Daria Lazic , Thomas Walter , Sabine Taschner-Mandl , Roxane Licandro

We present Deep Compression Autoencoder (DC-AE), a new family of autoencoder models for accelerating high-resolution diffusion models. Existing autoencoder models have demonstrated impressive results at a moderate spatial compression ratio…

Computer Vision and Pattern Recognition · Computer Science 2025-05-20 Junyu Chen , Han Cai , Junsong Chen , Enze Xie , Shang Yang , Haotian Tang , Muyang Li , Yao Lu , Song Han

Exact calculation of electronic properties of molecules is a fundamental step for intelligent and rational compounds and materials design. The intrinsically graph-like and non-vectorial nature of molecular data generates a unique and…

Chemical Physics · Physics 2019-10-29 Alain Tchagang , Julio Valdés

Due to the limitations in the accuracy and robustness of current electroencephalogram (EEG) classification algorithms, applying motor imagery (MI) for practical Brain-Computer Interface (BCI) applications remains challenging. This paper…

Human-Computer Interaction · Computer Science 2023-12-21 Shiwei Cheng , Yuejiang Hao