Related papers: Cluster and then Embed: A Modular Approach for Vis…

When visualizing a high-dimensional dataset, dimension reduction techniques are commonly employed which provide a single 2-dimensional view of the data. We describe ENS-t-SNE: an algorithm for Embedding Neighborhoods Simultaneously that…

Nowadays, as data becomes increasingly complex and distributed, data analyses often involve several related datasets that are stored on different servers and probably owned by different stakeholders. While there is an emerging need to…

Low-dimensional embeddings and visualizations are an indispensable tool for analysis of high-dimensional data. State-of-the-art methods, such as tSNE and UMAP, excel in unveiling local structures hidden in high-dimensional data and are…

Neighbor Embedding (NE) aims to preserve pairwise similarities between data items and has been shown to yield an effective principle for data visualization. However, even the best existing NE methods such as Stochastic Neighbor Embedding…

$t$-SNE is an embedding method that the data science community has widely Two interesting characteristics of t-SNE are the structure preservation property and the answer to the crowding problem, where all neighbors in high dimensional space…

Non-linear dimensionality reduction can be performed by \textit{manifold learning} approaches, such as Stochastic Neighbour Embedding (SNE), Locally Linear Embedding (LLE) and Isometric Feature Mapping (ISOMAP). These methods aim to produce…

Stochastic neighbor embedding (SNE) methods $t$-SNE, UMAP are two most popular dimensionality reduction methods for data visualization. Contrastive learning, especially self-supervised contrastive learning (SSCL), has showed great success…

Cluster visualization is an essential task for nonlinear dimensionality reduction as a data analysis tool. It is often believed that Student t-Distributed Stochastic Neighbor Embedding (t-SNE) can show clusters for well clusterable data,…

Stochastic Neighbor Embedding (SNE) algorithms like UMAP and tSNE often produce visualizations that do not preserve the geometry of noisy and high dimensional data. In particular, they can spuriously separate connected components of the…

This paper investigates the theoretical foundations of the t-distributed stochastic neighbor embedding (t-SNE) algorithm, a popular nonlinear dimension reduction and data visualization method. A novel theoretical framework for the analysis…

With the increasing availability of high-dimensional data, analysts often rely on exploratory data analysis to understand complex data sets. A key approach to exploring such data is dimensionality reduction, which embeds high-dimensional…

High-dimensional data visualization is crucial in the big data era and these techniques such as t-SNE and UMAP have been widely used in science and engineering. Big data, however, is often distributed across multiple data centers and…

tSNE and UMAP are popular dimensionality reduction algorithms due to their speed and interpretable low-dimensional embeddings. Despite their popularity, however, little work has been done to study their full span of differences. We…

The clustering and visualisation of high-dimensional data is a ubiquitous task in modern data science. Popular techniques include nonlinear dimensionality reduction methods like t-SNE or UMAP. These methods face the `scale-problem' of…

Scientists in many fields have the common and basic need of dimensionality reduction: visualizing the underlying structure of the massive multivariate data in a low-dimensional space. However, many dimensionality reduction methods confront…

We present a new technique for visualizing high-dimensional data called cluster MDS (cl-MDS), which addresses a common difficulty of dimensionality reduction methods: preserving both local and global structures of the original sample in a…

Dimensional data reduction methods are fundamental to explore and visualize large data sets. Basic requirements for unsupervised data exploration are simplicity, flexibility and scalability. However, current methods show complex…

Data visualisation helps understanding data represented by multiple variables, also called features, stored in a large matrix where individuals are stored in lines and variable values in columns. These data structures are frequently called…

Two-dimensional data maps can visually reveal information about the relations between data instances. Popular techniques to construct data maps are t-SNE and UMAP. The resulting point-based visualizations, though, provide information only…

We introduce an improved unsupervised clustering protocol specially suited for large-scale structured data. The protocol follows three steps: a dimensionality reduction of the data, a density estimation over the low dimensional…