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Subgraph counting aims to count the occurrences of a subgraph template T in a given network G. The basic problem of computing structural properties such as counting triangles and other subgraphs has found applications in diverse domains.…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-03-12 Langshi Chen , Jiayu Li , Ariful Azad , Lei Jiang , Madhav Marathe , Anil Vullikanti , Andrey Nikolaev , Egor Smirnov , Ruslan Israfilov , Judy Qiu

RDF data are used to model knowledge in various areas such as life sciences, Semantic Web, bioinformatics, and social graphs. The size of real RDF data reaches billions of triples. This calls for a framework for efficiently processing RDF…

Databases · Computer Science 2015-06-11 Jinha Kim , Hyungyu Shin , Wook-Shin Han , Sungpack Hong , Hassan Chafi

Finding dense subgraphs of a large graph is a standard problem in graph mining that has been studied extensively both for its theoretical richness and its many practical applications. In this paper we introduce a new family of dense…

Data Structures and Algorithms · Computer Science 2021-06-07 Nate Veldt , Austin R. Benson , Jon Kleinberg

While Graph Neural Networks (GNNs) are popular in the deep learning community, they suffer from several challenges including over-smoothing, over-squashing, and gradient vanishing. Recently, a series of models have attempted to relieve…

Machine Learning · Computer Science 2022-11-18 Junxiang Wang , Hongyi Li , Zheng Chai , Yongchao Wang , Yue Cheng , Liang Zhao

Graph Neural Networks (GNNs) have demonstrated remarkable performance in a wide range of tasks, such as node classification, link prediction, and graph classification, by exploiting the structural information in graph-structured data.…

Machine Learning · Computer Science 2026-01-09 Oscar Llorente , Jaime Boal , Eugenio F. Sánchez-Úbeda , Antonio Diaz-Cano , Miguel Familiar

Estimating the frequency of sub-graphs is of importance for many tasks, including sub-graph isomorphism, kernel-based anomaly detection, and network structure analysis. While multiple algorithms were proposed for full enumeration or…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-01-28 Itay Levinas , Roy Scherz , Yoram Louzoun

Graph pattern matching is a routine process for a wide variety of applications such as social network analysis. It is typically defined in terms of subgraph isomorphism which is NP-Complete. To lower its complexity, many extensions of graph…

Databases · Computer Science 2018-04-13 Houari Mahfoud

Recently, graph mining approaches have become very popular, especially in domains such as bioinformatics, chemoinformatics and social networks. In this scope, one of the most challenging tasks is frequent subgraph discovery. This task has…

Databases · Computer Science 2016-08-24 Sabeur Aridhi , Laurent d'Orazio , Mondher Maddouri , Engelbert Mephu Nguifo

We present a parallel version of the cut-pursuit algorithm for minimizing functionals involving the graph total variation. We show that the decomposition of the iterate into constant connected components, which is at the center of this…

Data Structures and Algorithms · Computer Science 2019-05-08 Hugo Raguet , Loic Landrieu

Subgraph matching is a compute-intensive problem that asks to enumerate all the isomorphic embeddings of a query graph within a data graph. This problem is generally solved with backtracking, which recursively evolves every possible partial…

Databases · Computer Science 2020-12-29 Junya Arai , Makoto Onizuka , Yasuhiro Fujiwara , Sotetsu Iwamura

As one of the most fundamental tasks in graph theory, subgraph matching is a crucial task in many fields, ranging from information retrieval, computer vision, biology, chemistry and natural language processing. Yet subgraph matching problem…

Machine Learning · Computer Science 2022-09-19 Zixun Lan , Limin Yu , Linglong Yuan , Zili Wu , Qiang Niu , Fei Ma

Subgraph matching is the problem of finding all the occurrences of a small graph, called the query, in a larger graph, called the target. Although the problem has been widely studied in simple graphs, few solutions have been proposed for…

In this paper, we study a new graph learning problem: learning to count subgraph isomorphisms. Different from other traditional graph learning problems such as node classification and link prediction, subgraph isomorphism counting is…

Machine Learning · Computer Science 2020-06-19 Xin Liu , Haojie Pan , Mutian He , Yangqiu Song , Xin Jiang , Lifeng Shang

Motifs are the fundamental components of complex systems. The topological structure of networks representing complex systems and the frequency and distribution of motifs in these networks are intertwined. The complexities associated with…

Social and Information Networks · Computer Science 2020-05-21 Ali Jazayeri , Christopher C. Yang

Graph mining applications analyze the structural properties of large graphs, and they do so by finding subgraph isomorphisms, which makes them computationally intensive. Existing graph mining techniques including both custom graph mining…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-12-09 Kasra Jamshidi , Keval Vora

We study dynamic graph algorithms in the Massively Parallel Computation model, which was inspired by practical data processing systems. Our goal is to provide algorithms that can efficiently handle large batches of edge insertions and…

Data Structures and Algorithms · Computer Science 2021-01-12 Krzysztof Nowicki , Krzysztof Onak

With the increase of graph size, it becomes difficult or even impossible to visualize graph structures clearly within the limited screen space. Consequently, it is crucial to design effective visual representations for large graphs. In this…

Social and Information Networks · Computer Science 2024-08-30 Hong Zhou , Peifeng Lai , Zhida Sun , Xiangyuan Chen , Yang Chen , Huisi Wu , Yong Wang

We consider the explanation problem of Graph Neural Networks (GNNs). Most existing GNN explanation methods identify the most important edges or nodes but fail to consider substructures, which are more important for graph data. The only…

Machine Learning · Computer Science 2023-02-28 Zhaoning Yu , Hongyang Gao

Finding dense subgraphs of a large network is a fundamental problem in graph mining that has been studied extensively both for its theoretical richness and its many practical applications over the last five decades. However, most existing…

Social and Information Networks · Computer Science 2023-10-10 Ali Behrouz , Farnoosh Hashemi

Hypergraphs are generalisation of graphs in which a hyperedge can connect any number of vertices. It can describe n-ary relationships and high-order information among entities compared to conventional graphs. In this paper, we study the…

Databases · Computer Science 2023-02-21 Zhengyi Yang , Wenjie Zhang , Xuemin Lin , Ying Zhang , Shunyang Li