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Structural biology has made significant progress in determining membrane proteins, leading to a remarkable increase in the number of available structures in dedicated databases. The inherent complexity of membrane protein structures,…

Deep neural networks are increasingly employed in high-stakes medical applications, despite their tendency for shortcut learning in the presence of spurious correlations, which can have potentially fatal consequences in practice. Whereas a…

Artificial Intelligence · Computer Science 2025-07-30 Frederik Pahde , Thomas Wiegand , Sebastian Lapuschkin , Wojciech Samek

The rise in frequency and complexity of malware attacks are viewed as a major threat to modern digital infrastructure, which means that traditional signature-based detection methods are becoming less effective. As cyber threats continue to…

Cryptography and Security · Computer Science 2026-01-13 Rakesh Keshava , Sathish Kuppan Pandurangan , M. Sakthivanitha , Sankaranainar Parmsivan , Goutham Sunkara , R. Maruthi

Pelvic diseases in women of reproductive age represent a major global health burden, with diagnosis frequently delayed due to high anatomical variability, complicating MRI interpretation. Existing AI approaches are largely disease-specific…

As Artificial Intelligence (AI) becomes increasingly integrated into microgrid control systems, the risk of malicious actors exploiting vulnerabilities in Machine Learning (ML) algorithms to disrupt power generation and distribution grows.…

Cryptography and Security · Computer Science 2025-03-26 Ahmed Omara , Burak Kantarci

Predicting the binding of viral peptides to the major histocompatibility complex with machine learning can potentially extend the computational immunology toolkit for vaccine development, and serve as a key component in the fight against a…

Quantitative Methods · Quantitative Biology 2021-04-19 Johanna Vielhaben , Markus Wenzel , Eva Weicken , Nils Strodthoff

The application of artificial intelligence (AI) in medical imaging has revolutionized diagnostic practices, enabling advanced analysis and interpretation of radiological data. This study presents a comprehensive evaluation of…

Image and Video Processing · Electrical Eng. & Systems 2025-07-22 Zhijin He , Alan B. McMillan

Artificial intelligence has started to transform histopathology impacting clinical diagnostics and biomedical research. However, while many computational pathology approaches have been proposed, most current AI models are limited with…

Recent advances in generative biology have enabled the design of novel proteins, creating significant opportunities for drug discovery while also introducing new risks, including the potential development of synthetic bioweapons. Existing…

Quantitative Methods · Quantitative Biology 2025-09-04 Jonathan Feldman , Tal Feldman

Chest X-ray imaging is commonly used to diagnose pneumonia, but accurately localizing the pneumonia-affected regions typically requires detailed pixel-level annotations, which are costly and time consuming to obtain. To address this…

Computer Vision and Pattern Recognition · Computer Science 2026-01-15 Kiran Shahi , Anup Bagale

Breast cancer screening programmes increasingly seek to move from one-size-fits-all interval to risk-adapted and personalized strategies. Deep learning (DL) has enabled image-based risk models with stronger 1- to 5-year prediction than…

Computer Vision and Pattern Recognition · Computer Science 2026-02-17 Ruggiero Santeramo , Igor Zubarev , Florian Jug

Deep Learning approaches in dermatological image classification have shown promising results, yet the field faces significant methodological challenges that impede proper evaluation. This paper presents a dual contribution: first, a…

Image and Video Processing · Electrical Eng. & Systems 2025-02-05 Łukasz Miętkiewicz , Leon Ciechanowski , Dariusz Jemielniak

Icosahedral viruses have their infectious genome encapsulated by a shell assembled by a multiscale process, starting from an integer multiple of 60 viral capsid or coat protein (VP) monomers. We predict and validate inter-atomic hotspot…

Biomolecules · Quantitative Biology 2021-01-27 Ruijin Wu , Rahul Prabhu , Aysegul Ozkan , Meera Sitharam

Identification of antimicrobial peptides is an important and necessary issue in today's era. Antimicrobial peptides are essential as an alternative to antibiotics for biomedical applications and many other practical applications. These…

Machine Learning · Computer Science 2025-12-17 Reyhaneh Keshavarzpour , Eghbal Mansoori

Therapeutic antibody development has become an increasingly popular approach for drug development. To date, antibody therapeutics are largely developed using large scale experimental screens of antibody libraries containing hundreds of…

Quantitative Methods · Quantitative Biology 2022-10-07 Lin Li , Esther Gupta , John Spaeth , Leslie Shing , Tristan Bepler , Rajmonda Sulo Caceres

Antimicrobial peptides (AMPs) play important roles in cancer, autoimmune diseases, and aging. A critical aspect of AMP functionality is their targeted interaction with pathogen membranes, which often possess altered lipid compositions.…

Human mesh recovery from single images remains challenging due to inherent depth ambiguity and limited generalization across domains. While recent methods combine regression and optimization approaches, they struggle with poor…

Computer Vision and Pattern Recognition · Computer Science 2026-03-30 Shaurjya Mandal , Nutan Sharma , John Galeotti

In the past, the development of vaccines and immunotherapeutics relied heavily on trial-and-error experimentation and extensive in vivo testing, often requiring years of pre-clinical and clinical trials. Today, artificial intelligence (AI)…

Artificial Intelligence · Computer Science 2025-06-17 Elhoucine Elfatimi , Yassir Lekbach , Swayam Prakash , Lbachir BenMohamed

Accurate prediction of antibody structure is a central task in the design and development of monoclonal antibodies, notably to understand both their developability and their binding properties. In this article, we introduce ABodyBuilder3,…

Biomolecules · Quantitative Biology 2024-06-03 Henry Kenlay , Frédéric A. Dreyer , Daniel Cutting , Daniel Nissley , Charlotte M. Deane

For many patients, current ovarian cancer treatments offer limited clinical benefit. For some therapies, it is not possible to predict patients' responses, potentially exposing them to the adverse effects of treatment without any…

Image and Video Processing · Electrical Eng. & Systems 2023-10-20 Jack Breen , Katie Allen , Kieran Zucker , Geoff Hall , Nishant Ravikumar , Nicolas M. Orsi
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