English
Related papers

Related papers: DESA: An R Package for Detecting Epidemics using a…

200 papers

Measles is a significant source of global disease burden and child mortality. Measles vaccination through routine immunization (RI) programs in high-burden settings remains a challenge due to poor health care infrastructure and access.…

Methodology · Statistics 2020-10-20 Tracy Qi Dong , Jon Wakefield

Infectious diseases often spread faster near their peak than would be predicted given early data on transmission. Despite the commonality of this phenomena, there are no known general mechanisms able to cause an exponentially spreading dis-…

Quantitative Methods · Quantitative Biology 2017-07-06 Samuel V. Scarpino , Antoine Allard , Laurent Hebert-Dufresne

Studies about epidemic modelling have been conducted since before 19th century. Both deterministic and stochastiic model were used to capture the dynamic of infection in the population. The purpose of this project is to investigate the…

Populations and Evolution · Quantitative Biology 2018-03-06 Kurnia Susvitasari

Epidemiologists use a variety of statistical algorithms for the early detection of outbreaks. The practical usefulness of such methods highly depends on the trade-off between the detection rate of outbreaks and the chances of raising a…

Machine Learning · Computer Science 2019-07-18 Moritz Kulessa , Eneldo Loza Mencía , Johannes Fürnkranz

Reliable and timely dengue predictions provide actionable lead time for targeted vector control and clinical preparedness, reducing preventable diseases and health-system costs in at-risk communities. Dengue forecasting often relies on…

Applications · Statistics 2025-12-01 Saman Hosseini , Lee W. Cohnstaedt , Caterina Scoglio

In this demonstration, we present a privacy-preserving epidemic surveillance system. Recently, many countries that suffer from coronavirus crises attempt to access citizen's location data to eliminate the outbreak. However, it raises…

Databases · Computer Science 2020-06-09 Yang Cao , Shun Takagi , Yonghui Xiao , Li Xiong , Masatoshi Yoshikawa

Mathematical models are often regarded as recent innovations in the description and analysis of infectious disease outbreaks and epidemics, but simple models have been in use for projection of epidemic trajectories for more than a century.…

Many datasets describing contacts in a population suffer from incompleteness due to population sampling and underreporting of contacts. Data-driven simulations of spreading processes using such incomplete data lead to an underestimation of…

Physics and Society · Physics 2017-09-07 Julie Fournet , Alain Barrat

Sepsis, a critical condition from the body's response to infection, poses a major global health crisis affecting all age groups. Timely detection and intervention are crucial for reducing healthcare expenses and improving patient outcomes.…

Machine Learning · Computer Science 2024-07-12 MohammadAmin Ansari Khoushabar , Parviz Ghafariasl

This paper describes the R package imputeTestbench that provides a testbench for comparing imputation methods for missing data in univariate time series. The imputeTestbench package can be used to simulate the amount and type of missing…

Methodology · Statistics 2020-05-20 Neeraj Bokde , Kishore Kulat , Marcus W Beck , Gualberto Asencio-Cortés

Sepsis is an organ dysfunction caused by a deregulated immune response to an infection. Early sepsis prediction and identification allow for timely intervention, leading to improved clinical outcomes. Clinical calculators (e.g., the…

Machine Learning · Computer Science 2025-01-13 Changchang Yin , Shihan Fu , Bingsheng Yao , Thai-Hoang Pham , Weidan Cao , Dakuo Wang , Jeffrey Caterino , Ping Zhang

In recent years, sentiment analysis and emotion classification are two of the most abundantly used techniques in the field of Natural Language Processing (NLP). Although sentiment analysis and emotion classification are used commonly in…

Machine Learning · Computer Science 2021-05-05 Muhammad Zain Ali , Kashif Javed , Ehsan ul Haq , Anoshka Tariq

Parameter inference and state estimation in stochastic and partially observed biological systems remain major problems in mathematical biology. In this work, we introduce a two-dimensional lattice graph model for the spread of infectious…

Quantitative Methods · Quantitative Biology 2026-05-29 Ihtisham Ul Haq , Serge Richard

The DEViaN-LM is a R package that allows to detect the values poorly explained by a Gaussian linear model. The procedure is based on the maximum of the absolute value of the studentized residuals, which is a free statistic of the parameters…

Mathematical Software · Computer Science 2025-11-20 Geoffroy Berthelot , Guillaume Saulière , Jérôme Dedecker

Current methods for the detection of contagious outbreaks give contemporaneous information about the course of an epidemic at best. Individuals at the center of a social network are likely to be infected sooner, on average, than those at…

Physics and Society · Physics 2011-07-26 Nicholas A. Christakis , James H. Fowler

Infectious diseases are one of the leading causes of morbidity and mortality around the world; thus, forecasting their impact is crucial for planning an effective response strategy. According to the Centers for Disease Control and…

Populations and Evolution · Quantitative Biology 2015-05-18 Kyle S. Hickmann , Geoffrey Fairchild , Reid Priedhorsky , Nicholas Generous , James M. Hyman , Alina Deshpande , Sara Y. Del Valle

Process data refer to data recorded in the log files of computer-based items. These data, represented as timestamped action sequences, keep track of respondents' response processes of solving the items. Process data analysis aims at…

Computation · Statistics 2020-06-11 Xueying Tang , Susu Zhang , Zhi Wang , Jingchen Liu , Zhiliang Ying

In this article, we focus on the analysis of the potential factors driving the spread of influenza, and possible policies to mitigate the adverse effects of the disease. To be precise, we first invoke discrete Fourier transform (DFT) to…

Machine Learning · Computer Science 2019-12-09 Ziming Liu , Yixuan Wang , Zizhao Han , Dian Wu

As an alternative to using administrative areas for the evaluation of small-area health inequalities, Sauzet et al. suggested to take an ego-centred approach and model the spatial correlation structure of health outcomes at the individual…

Computation · Statistics 2024-05-14 Julia Dyck , Jan-Ole Koslik , Odile Sauzet

Identification of the influential clinical symptoms and laboratory features that help in the diagnosis of dengue fever in early phase of the illness would aid in designing effective public health management and virological surveillance…

Machine Learning · Statistics 2015-02-03 Vadrevu Sree Hari Rao , Mallenahalli Naresh Kumar