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In-vivo optical microscopy is advancing into routine clinical practice for non-invasively guiding diagnosis and treatment of cancer and other diseases, and thus beginning to reduce the need for traditional biopsy. However, reading and…

Image and Video Processing · Electrical Eng. & Systems 2020-01-07 Kivanc Kose , Alican Bozkurt , Christi Alessi-Fox , Melissa Gill , Caterina Longo , Giovanni Pellacani , Jennifer Dy , Dana H. Brooks , Milind Rajadhyaksha

Learning a medical image segmentation model is an inherently ambiguous task, as uncertainties exist in both images (noise) and manual annotations (human errors and bias) used for model training. To build a trustworthy image segmentation…

Image and Video Processing · Electrical Eng. & Systems 2023-08-17 Xinyu Bai , Wenjia Bai

Foundation models for interactive segmentation in 2D natural images and videos have sparked significant interest in building 3D foundation models for medical imaging. However, the domain gaps and clinical use cases for 3D medical imaging…

Computer Vision and Pattern Recognition · Computer Science 2024-11-26 Yufan He , Pengfei Guo , Yucheng Tang , Andriy Myronenko , Vishwesh Nath , Ziyue Xu , Dong Yang , Can Zhao , Benjamin Simon , Mason Belue , Stephanie Harmon , Baris Turkbey , Daguang Xu , Wenqi Li

Deep learning techniques, particularly convolutional neural networks, have shown great potential in computer vision and medical imaging applications. However, deep learning models are computationally demanding as they require enormous…

Signal Processing · Electrical Eng. & Systems 2022-06-07 Owais Ali , Hazrat Ali , Syed Ayaz Ali Shah , Aamir Shahzad

We investigated the use of a U-Net convolutional neural network for denoising simulated medium-resolution spectroscopic observations of stars. Simulated spectra were generated under realistic observational conditions resembling the Subaru…

Instrumentation and Methods for Astrophysics · Physics 2025-04-04 Balázs Pál , László Dobos

Deep image registration has demonstrated exceptional accuracy and fast inference. Recent advances have adopted either multiple cascades or pyramid architectures to estimate dense deformation fields in a coarse-to-fine manner. However, due…

Computer Vision and Pattern Recognition · Computer Science 2024-07-19 Xinxing Cheng , Xi Jia , Wenqi Lu , Qiufu Li , Linlin Shen , Alexander Krull , Jinming Duan

This paper introduces Spectral U-Net, a novel deep learning network based on spectral decomposition, by exploiting Dual Tree Complex Wavelet Transform (DTCWT) for down-sampling and inverse Dual Tree Complex Wavelet Transform (iDTCWT) for…

Image and Video Processing · Electrical Eng. & Systems 2024-09-17 Yaopeng Peng , Milan Sonka , Danny Z. Chen

Image segmentation is a branch of computer vision that is widely used in real world applications including biomedical image processing. With recent advancement of deep learning, image segmentation has achieved at a very high level…

Image and Video Processing · Electrical Eng. & Systems 2023-05-25 Nima Hassanpour , Abouzar Ghavami

This study explores the potential of graph neural networks (GNNs) to enhance semantic segmentation across diverse image modalities. We evaluate the effectiveness of a novel GNN-based U-Net architecture on three distinct datasets: PascalVOC,…

Computer Vision and Pattern Recognition · Computer Science 2025-01-22 Aryan Singh , Pepijn Van de Ven , Ciarán Eising , Patrick Denny

Foundation models, pre-trained on large image datasets and capable of capturing rich feature representations, have recently shown potential for zero-shot image registration. However, their performance has mostly been tested in the context…

Image and Video Processing · Electrical Eng. & Systems 2025-08-12 Hanxue Gu , Yaqian Chen , Nicholas Konz , Qihang Li , Maciej A. Mazurowski

Deep Neural Networks (DNNs) are widely used for decision making in a myriad of critical applications, ranging from medical to societal and even judicial. Given the importance of these decisions, it is crucial for us to be able to interpret…

Computer Vision and Pattern Recognition · Computer Science 2022-11-28 Teddy Koker , Fatemehsadat Mireshghallah , Tom Titcombe , Georgios Kaissis

We propose a 2D Encoder-Decoder based deep learning architecture for semantic segmentation, that incorporates anatomical priors by imitating the encoder component of an autoencoder in latent space. The autoencoder is additionally enhanced…

Computer Vision and Pattern Recognition · Computer Science 2019-03-25 Duc Duy Pham , Gurbandurdy Dovletov , Sebastian Warwas , Stefan Landgraeber , Marcus Jäger , Josef Pauli

Medical image segmentation is an important step in medical image analysis. With the rapid development of convolutional neural network in image processing, deep learning has been used for medical image segmentation, such as optic disc…

Computer Vision and Pattern Recognition · Computer Science 2019-03-08 Zaiwang Gu , Jun Cheng , Huazhu Fu , Kang Zhou , Huaying Hao , Yitian Zhao , Tianyang Zhang , Shenghua Gao , Jiang Liu

Medical image segmentation is a fundamental task in the community of medical image analysis. In this paper, a novel network architecture, referred to as Convolution, Transformer, and Operator (CTO), is proposed. CTO employs a combination of…

Computer Vision and Pattern Recognition · Computer Science 2023-05-02 Yi Lin , Dong Zhang , Xiao Fang , Yufan Chen , Kwang-Ting Cheng , Hao Chen

Background:Convolutional Neural Networks(CNN) and Vision Transformers(ViT) are the main techniques used in Medical image segmentation. However, CNN is limited to local contextual information, and ViT's quadratic complexity results in…

Computer Vision and Pattern Recognition · Computer Science 2025-04-07 Xuanyu Liu , Huiyun Yao , Jinggui Gao , Zhongyi Guo , Xue Zhang , Yulin Dong

Recently, many foundation models for medical image analysis such as MedSAM, SwinUNETR have been released and proven to be useful in multiple tasks. However, considering the inherent heterogeneity and inhomogeneity of real-world medical…

Computer Vision and Pattern Recognition · Computer Science 2024-10-29 Shangde Gao , Yichao Fu , Ke Liu , Hongxia Xu , Jian Wu

There is large consent that successful training of deep networks requires many thousand annotated training samples. In this paper, we present a network and training strategy that relies on the strong use of data augmentation to use the…

Computer Vision and Pattern Recognition · Computer Science 2015-05-19 Olaf Ronneberger , Philipp Fischer , Thomas Brox

Medical image registration plays a vital role in medical image processing. Extracting expressive representations for medical images is crucial for improving the registration quality. One common practice for this end is constructing a…

Image and Video Processing · Electrical Eng. & Systems 2025-05-09 Jinhai Xiang , Shuai Guo , Qianru Han , Dantong Shi , Xinwei He , Xiang Bai

The task of localizing and categorizing objects in medical images often remains formulated as a semantic segmentation problem. This approach, however, only indirectly solves the coarse localization task by predicting pixel-level scores,…

Computer Vision and Pattern Recognition · Computer Science 2021-06-01 Paul F. Jaeger , Simon A. A. Kohl , Sebastian Bickelhaupt , Fabian Isensee , Tristan Anselm Kuder , Heinz-Peter Schlemmer , Klaus H. Maier-Hein

Fully Convolutional Neural Networks (FCNNs) with contracting and expanding paths have shown prominence for the majority of medical image segmentation applications since the past decade. In FCNNs, the encoder plays an integral role by…

Image and Video Processing · Electrical Eng. & Systems 2021-10-12 Ali Hatamizadeh , Yucheng Tang , Vishwesh Nath , Dong Yang , Andriy Myronenko , Bennett Landman , Holger Roth , Daguang Xu
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