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In this paper we study the problem of learning phylogenies and hidden Markov models. We call a Markov model nonsingular if all transition matrices have determinants bounded away from 0 (and 1). We highlight the role of the nonsingularity…

Machine Learning · Computer Science 2016-08-16 Elchanan Mossel , Sébastien Roch

This paper addresses the problem of species classification in bird song recordings. The massive amount of available field recordings of birds presents an opportunity to use machine learning to automatically track bird populations. However,…

Audio and Speech Processing · Electrical Eng. & Systems 2021-10-08 Tom Denton , Scott Wisdom , John R. Hershey

Property inheritance -- a phenomenon where novel properties are projected from higher level categories (e.g., birds) to lower level ones (e.g., sparrows) -- provides a unique window into how humans organize and deploy conceptual knowledge.…

Computation and Language · Computer Science 2025-03-11 Juan Diego Rodriguez , Aaron Mueller , Kanishka Misra

Animals in groups often exchange calls, in patterns whose temporal structure may be influenced by contextual factors such as physical location and the social network structure of the group. We introduce a model-based analysis for temporal…

Quantitative Methods · Quantitative Biology 2016-01-22 Dan Stowell , Lisa Gill , David Clayton

In recent studies, diffusion models have shown promise as priors for solving audio inverse problems. These models allow us to sample from the posterior distribution of a target signal given an observed signal by manipulating the diffusion…

Audio and Speech Processing · Electrical Eng. & Systems 2024-10-22 Chin-Yun Yu , Emilian Postolache , Emanuele Rodolà , György Fazekas

Diffusion models have gained traction as powerful algorithms for synthesizing high-quality images. Central to these algorithms is the diffusion process, a set of equations which maps data to noise in a way that can significantly affect…

Machine Learning · Computer Science 2024-11-12 Subham Sekhar Sahoo , Aaron Gokaslan , Chris De Sa , Volodymyr Kuleshov

Insects are an integral part of our ecosystem. These often small and evasive animals have a big impact on their surroundings, providing a large part of the present biodiversity and pollination duties, forming the foundation of the food…

Sound · Computer Science 2022-11-18 Marius Faiß

Passive Acoustic Monitoring is a key tool for biodiversity conservation, but the large volumes of unsupervised audio it generates present major challenges for extracting meaningful information. Deep Learning offers promising solutions.…

Ecological and conservation studies monitoring bird communities typically rely on species classification based on bird vocalizations. Historically, this has been based on expert volunteers going into the field and making lists of the bird…

Methodology · Statistics 2026-05-29 Haoxuan Wang , Patrik Lauha , David B. Dunson

This work introduces the one-shot learning paradigm in the computational bioacoustics domain. Even though, most of the related literature assumes availability of data characterizing the entire class dictionary of the problem at hand, that…

Machine Learning · Computer Science 2021-05-04 Michelangelo Acconcjaioco , Stavros Ntalampiras

In this article we propose a novel method to estimate the frequency distribution of linguistic variables while controlling for statistical non-independence due to shared ancestry. Unlike previous approaches, our technique uses all available…

Populations and Evolution · Quantitative Biology 2021-03-22 Gerhard Jäger , Johannes Wahle

Vocal education in the music field is difficult to quantify due to the individual differences in singers' voices and the different quantitative criteria of singing techniques. Deep learning has great potential to be applied in music…

Audio and Speech Processing · Electrical Eng. & Systems 2024-11-01 Zhenyi Hou , Xu Zhao , Kejie Ye , Xinyu Sheng , Shanggerile Jiang , Jiajing Xia , Yitao Zhang , Chenxi Ban , Daijun Luo , Jiaxing Chen , Yan Zou , Yuchao Feng , Guangyu Fan , Xin Yuan

Self-supervised learning (SSL) in audio holds significant potential across various domains, particularly in situations where abundant, unlabeled data is readily available at no cost. This is pertinent in bioacoustics, where biologists…

Sound · Computer Science 2024-02-12 Ilyass Moummad , Romain Serizel , Nicolas Farrugia

Regenerating singing voices with altered lyrics while preserving melody consistency remains challenging, as existing methods either offer limited controllability or require laborious manual alignment. We propose YingMusic-Singer-Plus, a…

Audio and Speech Processing · Electrical Eng. & Systems 2026-04-10 Chunbo Hao , Junjie Zheng , Guobin Ma , Yuepeng Jiang , Huakang Chen , Wenjie Tian , Gongyu Chen , Zihao Chen , Lei Xie

We introduce a new class of semiparametric latent variable models for long memory discretized event data. The proposed methodology is motivated by a study of bird vocalizations in the Amazon rain forest; the timings of vocalizations exhibit…

Methodology · Statistics 2021-07-02 Antik Chakraborty , Otso Ovaskainen , David B. Dunson

Self-supervised speech models have demonstrated impressive performance in speech processing, but their effectiveness on non-speech data remains underexplored. We study the transfer learning capabilities of such models on bioacoustic…

Machine Learning · Computer Science 2025-12-10 Jules Cauzinille , Marius Miron , Olivier Pietquin , Masato Hagiwara , Ricard Marxer , Arnaud Rey , Benoit Favre

Insect population numbers and biodiversity have been rapidly declining with time, and monitoring these trends has become increasingly important for conservation measures to be effectively implemented. But monitoring methods are often…

Sound · Computer Science 2024-02-01 Marius Faiß , Dan Stowell

We apply deep learning methods, specifically long short-term memory (LSTM) networks, to music transcription modelling and composition. We build and train LSTM networks using approximately 23,000 music transcriptions expressed with a…

Sound · Computer Science 2016-05-02 Bob L. Sturm , João Felipe Santos , Oded Ben-Tal , Iryna Korshunova

Singing voice transcription converts recorded singing audio to musical notation. Sound contamination (such as accompaniment) and lack of annotated data make singing voice transcription an extremely difficult task. We take two approaches to…

Sound · Computer Science 2023-04-25 Xiangming Gu , Wei Zeng , Jianan Zhang , Longshen Ou , Ye Wang

Behavioral sequences of animals are often structured and can be described by probabilistic rules (or "action syntax"). The patterns of vocal elements in birdsong are a prime example. The encoding of such rules in neural circuits is poorly…

Neurons and Cognition · Quantitative Biology 2015-01-27 Yisi Zhang , Jason D. Wittenbach , Dezhe Z. Jin , Alexay Kozhevnikov