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Related papers: Diverse, Distinct, and Densely Packed DNA Droplets

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The influence of size differences, shape, mass and persistent motion on phase separation in binary mixtures has been intensively studied. Here we focus on the exclusive role of diffusivity differences in binary mixtures of equal-sized…

Soft Condensed Matter · Physics 2016-03-04 Simon N. Weber , Christoph A. Weber , Erwin Frey

Weak multivalent interactions govern a large variety of biological processes like cell-cell adhesion and virus-host interactions. These systems distinguish sharply between surfaces based on receptor density, known as superselectivity.…

Biological Physics · Physics 2023-06-30 Christine Linne , Eva Heemskerk , Jos Zwanikken , Daniela J. Kraft , Liedewij Laan

Engineered nanoparticles made from noble metals, rare-earth oxides or semiconductors are emerging as the central constituents of future nanotech developments. In this review, a survey of the complexing strategies between nanoparticles and…

Materials Science · Physics 2011-08-25 J. -P. Chapel , J. -F. Berret

When processing dense emulsions, complex flows stretch and deform droplets to the point of breakup, changing the droplet size distribution and the mechanical properties of the final product. For steady homogeneous flows, a droplet's shape…

Fluid Dynamics · Physics 2023-05-29 Joseph Peterson , Ioannis Bagkeris , Vipin Michael

Whereas entropy can induce phase behavior that is as rich as seen in energetic systems, microphase separation remains a very rare phenomenon in entropic systems. In this paper, we present a density functional approach to study the…

Soft Condensed Matter · Physics 2009-11-10 Paul P. F. Wessels , Bela M. Mulder

In analogy with classic rigidity problems of networks and frames, the elastic properties of hydrogels made of DNA nanostars (DNAns) are expected to strongly depend on the precise geometry of their building blocks. However, it is currently…

Soft Condensed Matter · Physics 2025-02-03 Yair Augusto Gutierrez Fosado

Deformed droplets are ubiquitous in various industrial applications, such as inkjet printing, lab-on-a-chip devices, and spray cooling, and can fundamentally affect the involved applications both favorably and unfavorably. Here, we employ…

DNA nanostar (DNAns) hydrogels are promising materials for in vivo applications, including tissue regeneration and drug and antibody delivery. However, a systematic and quantitative understanding of the design principles controlling their…

We numerically investigate the dependence of range of attractive potential on the phase separation of 2-D binary systems. Through extensive simulations and analysis, we show that when the range of attractive interactions approaches the…

Computational Physics · Physics 2024-05-14 D. C. Thakur , Jalim Singh , A. V. Anil Kumar

DNA nanotechnology promises to provide controllable self-assembly on the nanoscale, allowing for the design of static structures, dynamic machines and computational architectures. In this article I review the state-of-the art of DNA…

Soft Condensed Matter · Physics 2015-07-13 Thomas E. Ouldridge

We characterize the equilibrium thermodynamics of a thick polymer confined in a spherical region of space. This is used to gain insight into the DNA packaging process. The experimental reference system for the present study is the recent…

Statistical Mechanics · Physics 2007-05-23 Davide Marenduzzo , Cristian Micheletti

We explore by molecular dynamic simulations the thermodynamical behavior of an anomalous fluid confined inside rigid and flexible nanopores. The fluid is modeled by a two length scale potential. In the bulk this system exhibits the density…

Soft Condensed Matter · Physics 2014-02-05 Jose Rafael Bordin , Leandro B. Krott , Marcia C. Barbosa

Droplets are essential for spatially controlling biomolecules in cells. To work properly, cells need to control the emergence and morphology of droplets. On the one hand, driven chemical reactions can affect droplets profoundly. For…

Soft Condensed Matter · Physics 2024-03-14 Noah Ziethen , David Zwicker

Phase separation of saturated micellar network, as a result of cross-linking of branched micelles is established in mixed solutions of the anionic surfactant sodium laurylethersulfate (SLES) and the zwitterionic cocamidopropyl betaine…

Soft Condensed Matter · Physics 2020-08-27 M. T. Georgiev , L. A. Aleksova , P. A. Kralchevsky , K. D. Danov

The folding of RNA and DNA strands plays crucial roles in biological systems and bionanotechnology. However, studying these processes with high-resolution numerical models is beyond current computational capabilities due to the timescales…

Soft Condensed Matter · Physics 2024-02-07 F. Tosti Guerra , E. Poppleton , P. Šulc , L. Rovigatti

Recent breakthrough experiments on dipolar condensates have reported the creation of supersolids, including two-dimensional arrays of quantum droplets. Droplet arrays are, however, not the only possible non-trivial density arrangement…

Quantum Gases · Physics 2022-12-14 Albert Gallemí , Luis Santos

RNA-binding proteins form biomolecular condensates with RNA through phase separation, playing crucial roles in various cellular processes. While intrinsically disordered regions (IDRs) are key drivers of phase separation, additional factors…

Soft Condensed Matter · Physics 2026-05-07 Yui Matsushita , Ikki Yasuda , Fuga Watanabe , Eiji Yamamoto

The spatial organization of DNA involves DNA loop extrusion and the formation of protein-DNA condensates. While the significance of each process is increasingly recognized, their interplay remains unexplored. Using molecular dynamics…

Biological Physics · Physics 2025-01-31 Ryota Takaki , Yahor Savich , Jan Brugués , Frank Jülicher

Biological mixtures such as the cytosol may consist of thousands of distinct components. There is now a substantial body of evidence showing that, under physiological conditions, intracellular mixtures can phase separate into spatially…

Soft Condensed Matter · Physics 2017-03-06 William M. Jacobs , Daan Frenkel

Droplet evaporation of multicomponent droplets is essential for various physiochemical applications, e.g. in inkjet printing, spray cooling and microfabrication. In this work, we observe and study phase segregation of an evaporating sessile…

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