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For two resource-sharing species we explore the interplay of harvesting and dispersal strategies, as well as their influence on competition outcomes. Although the extinction of either species can be achieved by excessive culling, choosing a…

Populations and Evolution · Quantitative Biology 2025-12-12 Elena Braverman , Jenny Lawson

The comprehension of how local interactions arise in global collective behavior is of utmost importance in both biological and physical research. Traditional agent-based models often rely on static rules that fail to capture the dynamic…

Populations and Evolution · Quantitative Biology 2023-08-25 Jianan Li , Liang Li , Shiyu Zhao

As Evolutionary Dynamics moves from the realm of theory into application, algorithms are needed to move beyond simple models. Yet few such methods exist in the literature. Ecological and physiological factors are known to be central to…

Populations and Evolution · Quantitative Biology 2025-05-20 Bryce Allen Bagley , Navin Khoshnan , Claudia K Petritsch

Reinforcement learning techniques achieved human-level performance in several tasks in the last decade. However, in recent years, the need for interpretability emerged: we want to be able to understand how a system works and the reasons…

Machine Learning · Computer Science 2023-01-13 Leonardo Lucio Custode , Giovanni Iacca

Cooperation, fairness, trust, and resource coordination are cornerstones of modern civilization, yet their emergence remains inadequately explained by the persistent discrepancies between theoretical predictions and behavioral experiments.…

Populations and Evolution · Quantitative Biology 2026-05-21 Guozhong Zheng , Xin Ou , Shengfeng Deng , Jiqiang Zhang , Li Chen

The statistical properties of an ecosystem composed of species interacting via pairwise, random interactions and deterministic, concentration limiting self-interaction are studied analytically with tools of equilibrium statistical mechanics…

Disordered Systems and Neural Networks · Physics 2009-11-07 Viviane M. de Oliveira , J. F. Fontanari

Introducing environmental feedback into evolutionary game theory has led to the development of eco-evolutionary games, which have gained popularity due to their ability to capture the intricate interplay between the environment and…

Biological Physics · Physics 2023-08-08 Changyan Di , Qingguo Zhou , Jun Shen , Jinqiang Wang , Rui Zhou , Tianyi Wang

Understanding under what conditions interacting populations, whether they be plants, animals, or viral particles, coexist is a question of theoretical and practical importance in population biology. Both biotic interactions and…

Populations and Evolution · Quantitative Biology 2011-04-26 Sebastian J. Schreiber , Michel Benaïm , Kolawolé A. S. Atchadé

We analyze the long-term stability of a stochastic model designed to illustrate the adaptation of a population to variation in its environment. A piecewise-deterministic process modeling adaptation is coupled to a Feller logistic diffusion…

Probability · Mathematics 2021-09-14 Aurélien Velleret

We propose a reinforcement-learning algorithm to tackle the challenge of reconstructing phylogenetic trees. The search for the tree that best describes the data is algorithmically challenging, thus all current algorithms for phylogeny…

Populations and Evolution · Quantitative Biology 2023-03-14 Dana Azouri , Oz Granit , Michael Alburquerque , Yishay Mansour , Tal Pupko , Itay Mayrose

The Jungle Game is used in population dynamics to describe cyclic competition among species that interact via a food chain. The dynamics of the Jungle Game supports a heteroclinic network whose cycles represent coexisting species. The…

Dynamical Systems · Mathematics 2024-01-17 Sofia B. S. D. Castro , Ana M. J. Ferreira , Isabel S. Labouriau

Antipredator behaviour is a self-preservation strategy present in many biological systems, where individuals join the effort in a collective reaction to avoid being caught by an approaching predator. We study a nonhierarchical tritrophic…

Populations and Evolution · Quantitative Biology 2022-12-29 J. Menezes , S. Batista , M. Tenorio , E. A. Triaca , B. Moura

We develop a theoretical framework to understand the persistence and coexistence of competitive species in a spatially explicit metacommunity model with a heterogeneous dispersal kernel. Our analysis, based on methods from the physics of…

Populations and Evolution · Quantitative Biology 2025-03-14 Davide Bernardi , Giorgio Nicoletti , Prajwal Padmanabha , Samir Suweis , Sandro Azaele , Andrea Rinaldo , Amos Maritan

Repeated interactions are ubiquitous and known to promote social behaviour. While research often focuses on cooperation in the Prisoner's Dilemma, experimental evidence suggests repeated interactions also foster fairness. This study…

Adaptation and Self-Organizing Systems · Physics 2026-04-07 Prosanta Mandal , Arunava Patra , Sagar Chakraborty

What determines biodiversity in nature is a prominent issue in ecology, especially in biotic resource systems that are typically devoid of cross-feeding. Here, we show that by incorporating pairwise encounters among consumer individuals…

Populations and Evolution · Quantitative Biology 2025-06-18 Ju Kang , Shijie Zhang , Yiyuan Niu , Xin Wang

In this paper we explore the eco-evolutionary dynamics of a predator-prey model, where the prey population is structured according to a certain life history trait. The trait distribution within the prey population is the result of interplay…

Populations and Evolution · Quantitative Biology 2019-03-27 József Z. Farkas , A. Yu. Morozov

Individuals within any species exhibit differences in size, developmental state, or spatial location. These differences coupled with environmental fluctuations in demographic rates can have subtle effects on population persistence and…

Populations and Evolution · Quantitative Biology 2015-12-16 Gregory Roth , Sebastian J. Schreiber

The rock-paper-scissors game is a paradigmatic model for biodiversity, with applications ranging from microbial populations to human societies. Research has shown, however, that mobility jeopardizes biodiversity by promoting the formation…

Physics and Society · Physics 2016-07-18 Attila Szolnoki , Matjaz Perc

The "Kill the Winner" hypothesis is an attempt to address the problem of diversity in biology. It argues that host-specific predators control the population of each prey, preventing a winner from emerging and thus maintaining the…

Biological Physics · Physics 2018-01-03 Chi Xue , Nigel Goldenfeld

Antipredator behavior is present in many biological systems where individuals collectively react to an imminent attack. The antipredator response may influence spatial pattern formation and ecosystem stability but requires an organism's…

Populations and Evolution · Quantitative Biology 2021-11-10 J. Menezes , B. Moura
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