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Unraveling the complexities of Gene Regulatory Networks (GRNs) is crucial for understanding cellular processes and disease mechanisms. Traditional computational methods often struggle with the dynamic nature of these networks. This study…

Machine Learning · Computer Science 2025-03-04 Hakan T. Otal , Abdulhamit Subasi , Furkan Kurt , M. Abdullah Canbaz , Yasin Uzun

It has been observed that message-passing graph neural networks (GNN) sometimes struggle to maintain a healthy balance between the efficient/scalable modeling of long-range dependencies across nodes while avoiding unintended consequences…

Machine Learning · Computer Science 2025-05-21 Yongyi Yang , Tang Liu , Yangkun Wang , Zengfeng Huang , David Wipf

Graph Neural Networks (GNNs) have led to state-of-the-art performance on a variety of machine learning tasks such as recommendation, node classification and link prediction. Graph neural network models generate node embeddings by merging…

Machine Learning · Computer Science 2020-11-04 Yunpeng Weng , Xu Chen , Liang Chen , Wei Liu

The last decades have seen a growth in the number of cyber-attacks with severe economic and privacy damages, which reveals the need for network intrusion detection approaches to assist in preventing cyber-attacks and reducing their risks.…

Cryptography and Security · Computer Science 2023-10-11 Hamdi Friji , Alexis Olivereau , Mireille Sarkiss

Accurate simulation of granular flow dynamics is crucial for assessing various geotechnical risks, including landslides and debris flows. Granular flows involve a dynamic rearrangement of particles exhibiting complex transitions from…

Geophysics · Physics 2023-12-13 Yongjin Choi , Krishna Kumar

Real-time supervisory control of advanced reactors requires accurate forecasting of plant-wide thermal-hydraulic states, including locations where physical sensors are unavailable. Meeting this need calls for surrogate models that combine…

Machine Learning · Computer Science 2026-05-19 Akzhol Almukhametov , Doyeong Lim , Rui Hu , Yang Liu

Graph Neural Networks (GNNs) have become essential in interpreting relational data across various domains, yet, they often struggle to generalize to unseen graph data that differs markedly from training instances. In this paper, we…

Machine Learning · Computer Science 2024-12-10 Xinke Jiang , Rihong Qiu , Yongxin Xu , Wentao Zhang , Yichen Zhu , Ruizhe Zhang , Yuchen Fang , Xu Chu , Junfeng Zhao , Yasha Wang

Inspired by the immense success of deep learning, graph neural networks (GNNs) are widely used to learn powerful node representations and have demonstrated promising performance on different graph learning tasks. However, most real-world…

Machine Learning · Computer Science 2020-01-24 Kaize Ding , Yichuan Li , Jundong Li , Chenghao Liu , Huan Liu

Until recently, researchers used machine learning methods to compensate for hardware imperfections at the symbol level, indicating that optimum radio-frequency transceiver performance is possible. Nevertheless, such approaches neglect the…

The output prediction of quantum circuits is a formidably challenging task imperative in developing quantum devices. Motivated by the natural graph representation of quantum circuits, this paper proposes a Graph Neural Networks (GNNs)-based…

Quantum Physics · Physics 2026-03-10 Yuxiang Liu , Fanxu Meng , Lu Wang , Yi Hu , Zaichen Zhang , Xutao Yu

Graph neural networks (GNNs) have been applied into a variety of graph tasks. Most existing work of GNNs is based on the assumption that the given graph data is optimal, while it is inevitable that there exists missing or incomplete edges…

Machine Learning · Computer Science 2022-05-13 Qianggang Ding , Deheng Ye , Tingyang Xu , Peilin Zhao

Quantum circuit design is a key bottleneck for practical quantum machine learning on complex, real-world data. We present an automated framework that discovers and refines variational quantum circuits (VQCs) using graph-based Bayesian…

Quantum Physics · Physics 2025-12-11 Prashant Kumar Choudhary , Nouhaila Innan , Muhammad Shafique , Rajeev Singh

This study delves into the application of graph neural networks in the realm of traffic forecasting, a crucial facet of intelligent transportation systems. Accurate traffic predictions are vital for functions like trip planning, traffic…

Machine Learning · Computer Science 2023-10-30 Razib Hayat Khan , Jonayet Miah , S M Yasir Arafat , M M Mahbubul Syeed , Duc M Ca

Medical time-series data are characterized by irregular sampling, high noise levels, missing values, and strong inter-feature dependencies. Recurrent neural networks (RNNs), particularly gated architectures such as Long Short-Term Memory…

Machine Learning · Computer Science 2026-03-03 Maitri Krishna Sai

Graph neural networks (GNN) are a promising tool to predict magnetic properties of large multi-grain structures, which can speed up the search for rare-earth free permanent magnets. In this paper, we use our magnetic simulation data to…

Can we combine heterogenous graph structure with text to learn high-quality semantic and behavioural representations? Graph neural networks (GNN)s encode numerical node attributes and graph structure to achieve impressive performance in a…

Machine Learning · Computer Science 2022-06-23 Vassilis N. Ioannidis , Xiang Song , Da Zheng , Houyu Zhang , Jun Ma , Yi Xu , Belinda Zeng , Trishul Chilimbi , George Karypis

Current brain surface-based prediction models often overlook the variability of regional attributes at the cortical feature level. While graph neural networks (GNNs) excel at capturing regional differences, they encounter challenges when…

Neurons and Cognition · Quantitative Biology 2024-11-12 Zhuoshuo Li , Jiong Zhang , Youbing Zeng , Jiaying Lin , Dan Zhang , Jianjia Zhang , Duan Xu , Hosung Kim , Bingguang Liu , Mengting Liu

Graph Neural Networks (GNN) have recently gained popularity in the forecasting domain due to their ability to model complex spatial and temporal patterns in tasks such as traffic forecasting and region-based demand forecasting. Most of…

Machine Learning · Computer Science 2023-12-08 Abishek Sriramulu , Nicolas Fourrier , Christoph Bergmeir

The growing penetration of distributed energy resources (DERs), electric vehicles (EVs), and heat pumps (HPs) in distribution networks underscores the need for secure, computationally efficient optimal power flow (OPF) solutions.…

Systems and Control · Electrical Eng. & Systems 2026-04-15 Savvas Panagi , Chrysovalantis Spanias , Petros Aristidou

With the rapidly-developing high-speed wireless communications, the 60 GHz millimeter-wave frequency range and radio-over-fiber systems have been investigated as a promising solution to deliver mm-wave signals. Neural networks have been…

Signal Processing · Electrical Eng. & Systems 2020-05-20 Jeonghun Lee , Jiayuan He , Ke Wang