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We show that for all functions $t(n) \geq n$, every multitape Turing machine running in time $t$ can be simulated in space only $O(\sqrt{t \log t})$. This is a substantial improvement over Hopcroft, Paul, and Valiant's simulation of time…

Computational Complexity · Computer Science 2025-02-26 R. Ryan Williams

Williams (STOC 2025) recently proved that time-$t$ multitape Turing machines can be simulated using $O(\sqrt{t \log t})$ space using the Cook-Mertz (STOC 2024) tree evaluation procedure. As Williams notes, applying this result to fast…

Computational Complexity · Computer Science 2025-06-23 Yakov Shalunov

Standard simulations of Turing machines suggest a linear relationship between the temporal duration $t$ of a run and the amount of information that must be stored by known simulations to certify, verify, or regenerate the configuration at…

Computational Complexity · Computer Science 2025-12-08 Logan Nye

We present a compressed representation of tries based on top tree compression [ICALP 2013] that works on a standard, comparison-based, pointer machine model of computation and supports efficient prefix search queries. Namely, we show how to…

Data Structures and Algorithms · Computer Science 2019-09-23 Philip Bille , Inge Li Gørtz , Paweł Gawrychowski , Gad M. Landau , Oren Weimann

We show that the compressed suffix array and the compressed suffix tree of a string $T$ can be built in $O(n)$ deterministic time using $O(n\log\sigma)$ bits of space, where $n$ is the string length and $\sigma$ is the alphabet size.…

Data Structures and Algorithms · Computer Science 2016-11-15 J. Ian Munro , Gonzalo Navarro , Yakov Nekrich

In this work, we study the limits of compressed data structures, i.e., structures that support various queries on an input text $T\in\Sigma^n$ using space proportional to the size of $T$ in compressed form. Nearly all fundamental queries…

Data Structures and Algorithms · Computer Science 2025-10-23 Dominik Kempa , Tomasz Kociumaka

In this paper we investigate the problem of partitioning an input string T in such a way that compressing individually its parts via a base-compressor C gets a compressed output that is shorter than applying C over the entire T at once.…

Data Structures and Algorithms · Computer Science 2009-06-26 Paolo Ferragina , Igor Nitto , Rossano Venturini

We present an algorithm for computing a maximum agreement subtree of two unrooted evolutionary trees. It takes O(n^{1.5} log n) time for trees with unbounded degrees, matching the best known time complexity for the rooted case. Our…

Computational Engineering, Finance, and Science · Computer Science 2007-05-23 Ming-Yang Kao , Tak-Wah Lam , Wing-Kin Sung , Hing-Fung Ting

It is shown that every tree of size $n$ over a fixed set of $\sigma$ different ranked symbols can be decomposed (in linear time as well as in logspace) into $O\big(\frac{n}{\log_\sigma n}\big) = O\big(\frac{n \log \sigma}{\log n}\big)$ many…

Data Structures and Algorithms · Computer Science 2015-09-22 Moses Ganardi , Danny Hucke , Artur Jez , Markus Lohrey , Eric Noeth

We show that the compressed suffix array and the compressed suffix tree for a string of length $n$ over an integer alphabet of size $\sigma\leq n$ can both be built in $O(n)$ (randomized) time using only $O(n\log\sigma)$ bits of working…

Data Structures and Algorithms · Computer Science 2016-05-24 Djamal Belazzougui

Suffix tree (and the closely related suffix array) are fundamental structures capturing all substrings of a given text essentially by storing all its suffixes in the lexicographical order. In some applications, we work with a subset of $b$…

Data Structures and Algorithms · Computer Science 2016-08-03 Paweł Gawrychowski , Tomasz Kociumaka

Dynamic programming on various graph decompositions is one of the most fundamental techniques used in parameterized complexity. Unfortunately, even if we consider concepts as simple as path or tree decompositions, such dynamic programming…

The width measure treedepth, also known as vertex ranking, centered coloring and elimination tree height, is a well-established notion which has recently seen a resurgence of interest. Since graphs of bounded treedepth are more restricted…

Computational Complexity · Computer Science 2016-08-09 Li-Hsuan Chen , Felix Reidl , Peter Rossmanith , Fernando Sánchez Villaamil

In grammar-based compression a string is represented by a context-free grammar, also called a straight-line program (SLP), that generates only that string. We refine a recent balancing result stating that one can transform an SLP of size…

Data Structures and Algorithms · Computer Science 2021-07-02 Moses Ganardi

The treewidth of a graph is a useful combinatorial measure of how close the graph is to a tree. We prove that a quantum circuit with $T$ gates whose underlying graph has treewidth $d$ can be simulated deterministically in…

Quantum Physics · Physics 2009-07-12 Igor L. Markov , Yaoyun Shi

We present an algorithm that given a linear program with $n$ variables, $m$ constraints, and constraint matrix $A$, computes an $\epsilon$-approximate solution in $\tilde{O}(\sqrt{rank(A)}\log(1/\epsilon))$ iterations with high probability.…

Data Structures and Algorithms · Computer Science 2020-09-02 Yin Tat Lee , Aaron Sidford

Constant bit-size Transformers are known to be Turing complete, but existing constructions require $\Omega(s(n))$ chain-of-thought (CoT) steps per simulated Turing machine (TM) step, leading to impractical reasoning lengths. In this paper,…

Computational Complexity · Computer Science 2025-12-03 Qian Li , Yuyi Wang

We revisit tree compression with top trees (Bille et al, ICALP'13) and present several improvements to the compressor and its analysis. By significantly reducing the amount of information stored and guiding the compression step using a…

Data Structures and Algorithms · Computer Science 2015-06-16 Lorenz Hübschle-Schneider , Rajeev Raman

A breakthrough result of Cygan et al. (FOCS 2011) showed that connectivity problems parameterized by treewidth can be solved much faster than the previously best known time $\mathcal{O}^*(2^{\mathcal{O}(tw \log(tw))})$. Using their inspired…

Data Structures and Algorithms · Computer Science 2021-06-28 Falko Hegerfeld , Stefan Kratsch

Given two rooted, ordered, and labeled trees $P$ and $T$ the tree inclusion problem is to determine if $P$ can be obtained from $T$ by deleting nodes in $T$. This problem has recently been recognized as an important query primitive in XML…

Data Structures and Algorithms · Computer Science 2011-01-19 Philip Bille , Inge Li Goertz
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