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The inherent capabilities of a language model (LM) and the reasoning strategies it employs jointly determine its performance in reasoning tasks. While test-time scaling is regarded as an effective approach to tackling complex reasoning…

Computation and Language · Computer Science 2025-05-27 Zhihong Pan , Kai Zhang , Yuze Zhao , Yupeng Han

Target proteins that lack accessible binding pockets and conformational stability have posed increasing challenges for drug development. Induced proximity strategies, such as PROTACs and molecular glues, have thus gained attention as…

In recent years, natural language processing (NLP) models have demonstrated remarkable capabilities in various domains beyond traditional text generation. In this work, we introduce PeptideGPT, a protein language model tailored to generate…

Machine Learning · Computer Science 2024-10-28 Aayush Shah , Chakradhar Guntuboina , Amir Barati Farimani

Mental health disorders impose a substantial global socioeconomic burden. While large language models (LLMs) offer 24/7, non-judgmental interactions to address this gap, pretrained models lack contextual coherence and emotional alignment…

Computation and Language · Computer Science 2026-02-17 Eric Hua Qing Zhang , Julia Ive

Group relative policy optimization (GRPO) has become a standard post-training paradigm for improving reasoning and preference alignment in large language models (LLMs), and has recently shown strong effectiveness in LLM-based recommender…

Information Retrieval · Computer Science 2026-03-09 Yu Wang , Yonghui Yang , Le Wu , Jiancan Wu , Hefei Xu , Hui Lin

Recent advances in reasoning with large language models (LLMs)has shown remarkable reasoning capabilities in domains such as mathematics and coding, yet their application to clinical diagnosis remains underexplored. Here, we introduce…

Computation and Language · Computer Science 2025-04-16 Wuyang Lan , Wenzheng Wang , Changwei Ji , Guoxing Yang , Yongbo Zhang , Xiaohong Liu , Song Wu , Guangyu Wang

The reasoning abilities of large language models (LLMs) have improved with chain-of-thought (CoT) prompting, allowing models to solve complex tasks stepwise. However, training CoT capabilities requires detailed reasoning data, which is…

Artificial Intelligence · Computer Science 2025-04-11 Fu-Chieh Chang , Yu-Ting Lee , Hui-Ying Shih , Yi Hsuan Tseng , Pei-Yuan Wu

Recent advancements in reinforcement fine-tuning have significantly improved the reasoning ability of large language models (LLMs). In particular, methods such as group relative policy optimization (GRPO) have demonstrated strong…

Artificial Intelligence · Computer Science 2026-03-04 Yang Zhan , Yunhao Li , Zhang Chao , Yuxu Lu , Yan Li

Recent Large Language Models (LLMs) have significantly advanced natural language processing and automated decision-making. However, these models still encounter difficulties when performing complex reasoning tasks involving logical…

Computation and Language · Computer Science 2025-06-26 Yubo Dong , Hehe Fan

Large language models (LLMs) are increasingly embedded in AI-based tutoring systems. Can they faithfully model novice reasoning and metacognitive judgments? Existing evaluations emphasize problem-solving accuracy, overlooking the fragmented…

Computation and Language · Computer Science 2026-05-12 Conrad Borchers , Jill-Jênn Vie , Roger Azevedo

Machine reasoning has made great progress in recent years owing to large language models (LLMs). In the clinical domain, however, most NLP-driven projects mainly focus on clinical classification or reading comprehension, and under-explore…

Computation and Language · Computer Science 2024-05-13 Taeyoon Kwon , Kai Tzu-iunn Ong , Dongjin Kang , Seungjun Moon , Jeong Ryong Lee , Dosik Hwang , Yongsik Sim , Beomseok Sohn , Dongha Lee , Jinyoung Yeo

Large Language Models (LLMs) have demonstrated remarkable potential in code generation. The integration of Chain of Thought (CoT) reasoning can further boost their performance. However, current CoT methods often require manual writing or…

Software Engineering · Computer Science 2024-08-06 Guang Yang , Yu Zhou , Xiang Chen , Xiangyu Zhang , Terry Yue Zhuo , Taolue Chen

Generative retrieval (GR) is an emerging paradigm that leverages large language models (LLMs) to autoregressively generate document identifiers (docids) relevant to a given query. Prior works have focused on leveraging the generative…

Information Retrieval · Computer Science 2025-10-22 Yingchen Zhang , Ruqing Zhang , Jiafeng Guo , Wenjun Peng , Sen Li , Fuyu Lv

Reinforcement learning (RL) has recently become the dominant paradigm for strengthening the reasoning abilities of large language models (LLMs). Yet the rule-based reward functions commonly used on mathematical or programming benchmarks…

Artificial Intelligence · Computer Science 2025-09-09 Haoyang He , Zihua Rong , Kun Ji , Chenyang Li , Qing Huang , Chong Xia , Lan Yang , Honggang Zhang

Reinforcement learning (RL)-based enhancement of large language models (LLMs) often leads to reduced output diversity, undermining their utility in open-ended tasks like creative writing. Current methods lack explicit mechanisms for guiding…

Computation and Language · Computer Science 2026-01-15 Qian Cao , Yahui Liu , Wei Bi , Yi Zhao , Ruihua Song , Xiting Wang , Ruiming Tang , Guorui Zhou , Han Li

Large Language Models (LLMs) have succeeded remarkably in various natural language processing (NLP) tasks, yet their reasoning capabilities remain a fundamental challenge. While LLMs exhibit impressive fluency and factual recall, their…

Computation and Language · Computer Science 2025-05-29 Avinash Patil , Aryan Jadon

Large Language Models (LLMs) have demonstrated remarkable efficiency in tackling various tasks based on human instructions, but studies reveal that they often struggle with tasks requiring reasoning, such as math or physics. This limitation…

Computation and Language · Computer Science 2024-10-08 Ruoyu Wang , Xiaoxuan Li , Lina Yao

Large Language Models (LLMs) have exhibited remarkable proficiency in comprehending and generating natural language. On the other hand, personalized LLM response generation holds the potential to offer substantial benefits for individuals…

Computation and Language · Computer Science 2025-01-15 Kai Zhang , Yejin Kim , Xiaozhong Liu

We investigate how to teach large language models (LLMs) to perform scientific reasoning by leveraging expert discussions as a learning signal. Focusing on the genomics domain, we develop an automated pipeline to extract trainable data and…

Artificial Intelligence · Computer Science 2025-06-04 Ming Yin , Yuanhao Qu , Ling Yang , Le Cong , Mengdi Wang

Through reinforcement learning (RL) with outcome correctness rewards, large reasoning models (LRMs) with scaled inference computation have demonstrated substantial success on complex reasoning tasks. However, the one-sided reward, focused…

Computation and Language · Computer Science 2025-11-21 Jiashu Yao , Heyan Huang , Shuang Zeng , Chuwei Luo , WangJie You , Jie Tang , Qingsong Liu , Yuhang Guo , Yangyang Kang