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In this work, we study the problem of list decoding of insertions and deletions. We present a Johnson-type upper bound on the maximum list size. The bound is meaningful only when insertions occur. Our bound implies that there are binary…

Information Theory · Computer Science 2020-02-18 Tomohiro Hayashi , Kenji Yasunaga

We consider the problem of designing low-redundancy codes in settings where one must correct deletions in conjunction with substitutions or adjacent transpositions; a combination of errors that is usually observed in DNA-based data storage.…

Information Theory · Computer Science 2021-12-21 Ryan Gabrys , Venkatesan Guruswami , João Ribeiro , Ke Wu

Construction of capacity achieving deletion correcting codes has been a baffling challenge for decades. A recent breakthrough by Brakensiek $et~al$., alongside novel applications in DNA storage, have reignited the interest in this…

Information Theory · Computer Science 2018-06-26 Jin Sima , Netanel Raviv , Jehoshua Bruck

Regenerating codes for distributed storage have attracted much research interest in the past decade. Such codes trade the bandwidth needed to repair a failed node with the overall amount of data stored in the network. Minimum storage…

Information Theory · Computer Science 2016-02-16 Sreechakra Goparaju , Arman Fazeli , Alexander Vardy

BCH codes are an important class of linear codes and find extensive utilization in communication and disk storage systems.This paper mainly analyzes the negacyclic BCH code and cyclic BCH code of length $\frac{q^m-1}{2}$. For negacyclic BCH…

Information Theory · Computer Science 2024-07-02 Mengchen Lian

The repetition code is an important primitive for the techniques of quantum error correction. Here we implement repetition codes of at most $15$ qubits on the $16$ qubit \emph{ibmqx3} device. Each experiment is run for a single round of…

Quantum Physics · Physics 2018-08-31 James R. Wootton , Daniel Loss

MDS (maximum distance separable) array codes are widely used in storage systems due to their computationally efficient encoding and decoding procedures. An MDS code with r redundancy nodes can correct any r erasures by accessing (reading)…

Information Theory · Computer Science 2011-07-11 Zhiying Wang , Itzhak Tamo , Jehoshua Bruck

Erasure codes are an efficient means of storing data across a network in comparison to data replication, as they tend to reduce the amount of data stored in the network and offer increased resilience in the presence of node failures. The…

Information Theory · Computer Science 2016-11-17 K. V. Rashmi , Nihar B. Shah , P. Vijay Kumar

Permutation codes and multi-permutation codes have been widely considered due to their various applications, especially in flash memory. In this paper, we consider permutation codes and multi-permutation codes against a burst of stable…

Information Theory · Computer Science 2023-03-14 Yubo Sun , Yiwei Zhang , Gennian Ge

We consider the locally repairable codes (LRC), aiming at sequential recovering multiple erasures. We define the (n,k,r,t)-SLRC (Sequential Locally Repairable Codes) as an [n,k] linear code where any t'(>= t) erasures can be sequentially…

Information Theory · Computer Science 2016-11-01 Wentu Song , Kai Cai , Chau Yuen

Consider the set of all error--correcting block codes over a fixed alphabet with $q$ letters. It determines a recursively enumerable set of points in the unit square with coordinates $(R,\delta)$:= {\it (relative transmission rate, relative…

Information Theory · Computer Science 2011-07-22 Yuri I. Manin

MDS array codes are widely used in storage systems to protect data against erasures. We address the \emph{rebuilding ratio} problem, namely, in the case of erasures, what is the fraction of the remaining information that needs to be…

Information Theory · Computer Science 2016-11-17 Itzhak Tamo , Zhiying Wang , Jehoshua Bruck

This paper proposes a novel maximum-likelihood (ML) soft-decision decoding framework for linear block codes, termed error-building decoding (EBD). The complete decoding process can be performed using only the parity-check matrix, without…

Information Theory · Computer Science 2026-01-06 Guoda Qiu , Ling Liu , Yuejun Wei , Liping Li

Already in the 1960s, Levenshtein and others studied error-correcting codes that protect against synchronization errors, such as symbol insertions and deletions. However, despite significant efforts, progress on designing such codes has…

Information Theory · Computer Science 2021-01-05 Bernhard Haeupler , Amirbehshad Shahrasbi

MDS array codes are widely used in storage systems to protect data against erasures. We address the \emph{rebuilding ratio} problem, namely, in the case of erasures, what is the the fraction of the remaining information that needs to be…

Information Theory · Computer Science 2011-03-22 Itzhak Tamo , Zhiying Wang , Jehoshua Bruck

In this paper, we study how often unique decoding from $t$ insertions or $t$ deletions occurs for error correcting codes. Insertions and deletions frequently occur in synchronization problems and DNA, a medium which is beginning to be used…

Information Theory · Computer Science 2017-09-29 Kayvon Mazooji

We consider communication over the binary erasure channel (BEC) using low-density parity-check (LDPC) codes and belief propagation (BP) decoding. For fixed numbers of BP iterations, the bit error probability approaches a limit as…

Information Theory · Computer Science 2016-11-17 Ryuhei Mori , Toshiyuki Tanaka , Kenta Kasai , Kohichi Sakaniwa

Constructing Reed-Solomon (RS) codes that can correct insertion and deletion (ins-del) errors has been the focus of several recent studies. However, efficient decoding algorithms for such codes have received less attention and remain a…

Information Theory · Computer Science 2025-07-02 Shubhransh Singhvi

Owing to its several merits over other DNA sequencing technologies, nanopore sequencers hold an immense potential to revolutionize the efficiency of DNA storage systems. However, their higher error rates necessitate further research to…

Information Theory · Computer Science 2024-05-08 Anisha Banerjee , Yonatan Yehezkeally , Antonia Wachter-Zeh , Eitan Yaakobi

In the \emph{trace reconstruction problem}, an unknown source string $x \in \{0,1\}^n$ is transmitted through a probabilistic \emph{deletion channel} which independently deletes each bit with some fixed probability $\delta$ and concatenates…

Data Structures and Algorithms · Computer Science 2020-12-09 Xi Chen , Anindya De , Chin Ho Lee , Rocco A. Servedio , Sandip Sinha