Related papers: Reconstruction Codes for Deletions and Insertions:…
We consider the problem of constructing a code capable of correcting a single long tandem duplication error of variable length. As the main contribution of this paper, we present a $q$-ary efficiently encodable code of length $n+1$ and…
This paper presents conditions for constructing permutation-invariant quantum codes for deletion errors and provides a method for constructing them. Our codes give the first example of quantum codes that can correct two or more deletion…
We study codes that are list-decodable under insertions and deletions. Specifically, we consider the setting where a codeword over some finite alphabet of size $q$ may suffer from $\delta$ fraction of adversarial deletions and $\gamma$…
We consider the problem of correcting insertion and deletion errors in the $d$-dimensional space. This problem is well understood for vectors (one-dimensional space) and was recently studied for arrays (two-dimensional space). For vectors…
Nanopore sequencers are emerging as promising new platforms for high-throughput sequencing. As with other technologies, sequencer errors pose a major challenge for their effective use. In this paper, we present a novel information theoretic…
We prove that every $1$-error-correcting code over a finite field can be embedded in a $1$-perfect code of some larger length. Embedding in this context means that the original code is a subcode of the resulting $1$-perfect code and can be…
We construct deletion error-correcting codes in the oblivious model, where errors are adversarial but oblivious to the encoder's randomness. Oblivious errors bridge the gap between the adversarial and random error models, and are motivated…
Batch codes are a family of codes that represent a distributed storage system (DSS) of $n$ nodes so that any batch of $t$ data symbols can be retrieved by reading at most one symbol from each node. Fractional repetition codes are a family…
This paper studies \emph{linear} and \emph{affine} error-correcting codes for correcting synchronization errors such as insertions and deletions. We call such codes linear/affine insdel codes. Linear codes that can correct even a single…
We study segmented burst-deletion channels motivated by the observation that synchronization errors commonly occur in a bursty manner in real-world settings. In this channel model, transmitted sequences are implicitly divided into…
In this work we consider the list-decodability and list-recoverability of arbitrary $q$-ary codes, for all integer values of $q\geq 2$. A code is called $(p,L)_q$-list-decodable if every radius $pn$ Hamming ball contains less than $L$…
A $(k,\delta,\epsilon)$-locally decodable code $C: F_{q}^{n} \to F_{q}^{N}$ is an error-correcting code that encodes each message $\vec{x}=(x_{1},x_{2},...,x_{n}) \in F_{q}^{n}$ to $C(\vec{x}) \in F_{q}^{N}$ and has the following property:…
In the paper, the Levenshtein's sequence reconstruction problem is considered in the case where at most $t$ substitution errors occur in each of the $N$ channels and the decoder outputs a list of length $\mathcal{L}$. Moreover, it is…
Motivated by DNA-based storage applications, we study the problem of reconstructing a coded sequence from multiple traces. We consider the model where the traces are outputs of independent deletion channels, where each channel deletes each…
The sequence reconstruction problem asks for the recovery of a sequence from multiple noisy copies, where each copy may contain up to $r$ errors. In the case of permutations on \(n\) letters under the Hamming metric, this problem is closely…
The problem of correcting deletions has received significant attention, partly because of the prevalence of these errors in DNA data storage. In this paper, we study the problem of correcting a consecutive burst of at most $t$ deletions in…
In recent years, the emergence of DNA storage systems has led to a widespread focus on the research of codes correcting insertions, deletions, and classic substitutions. During the initial investigation, Levenshtein discovered the VT codes…
The present paper mainly studies limits and constructions of insertion and deletion (insdel for short) codes. The paper can be divided into two parts. The first part focuses on various bounds, while the second part concentrates on…
The sequence reconstruction problem for insertion/deletion channels has attracted significant attention owing to their applications recently in some emerging data storage systems, such as racetrack memories, DNA-based data storage. Our goal…
We give a complete answer to the following basic question: "What is the maximal fraction of deletions or insertions tolerable by $q$-ary list-decodable codes with non-vanishing information rate?" This question has been open even for binary…