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Mathematical models of photosynthesis-irradiance relationships in phytoplankton are used to compute integrated water-column photosynthetic rates and predict primary production. Models typically ignore an important phenomenon observed in…

Other Quantitative Biology · Quantitative Biology 2025-08-28 Mohammad M. Amirian , Zoe V. Finkel , Emmanuel Devred , Andrew J. Irwin

Advancements in artificial intelligence (AI) have greatly benefited plant phenotyping and predictive modeling. However, unrealized opportunities exist in leveraging AI advancements in model parameter optimization for parameter fitting in…

Computational Engineering, Finance, and Science · Computer Science 2025-01-28 Tong Lei , Kyle T. Rizzo , Brian N. Bailey

Full-image relighting remains a challenging problem due to the difficulty of collecting large-scale structured paired data, the difficulty of maintaining physical plausibility, and the limited generalizability imposed by data-driven priors.…

Computer Vision and Pattern Recognition · Computer Science 2026-01-30 Zhexin Liang , Zhaoxi Chen , Yongwei Chen , Tianyi Wei , Tengfei Wang , Xingang Pan

lightcurver is a photometric pipeline for time series astronomical imaging data, designed for the semi-automatic extraction of precise light curves from small, blended targets. Such targets include, but are not limited to, lensed quasars,…

Instrumentation and Methods for Astrophysics · Physics 2024-10-18 Frédéric Dux

We present Rainbow, a physically motivated framework which enables simultaneous multi-band light curve fitting. It allows the user to construct a 2-dimensional continuous surface across wavelength and time, even in situations where the…

We introduce an R package for fitting Stable Isotope Mixing Models (SIMMs) via both Markov chain Monte Carlo and Variational Bayes. The package is mainly used for estimating dietary contributions from food sources taken via measurements of…

Applications · Statistics 2023-06-14 Emma Govan , Andrew L. Jackson , Richard Inger , Stuart Bearhop , Andrew C. Parnell

In the era of large time-domain spectro-photometric surveys, surface variations such as starspots, chemical inhomogeneities, pulsations, rotational distortions, and binary interactions can now be directly detected and modelled. Accurately…

Solar and Stellar Astrophysics · Physics 2025-11-17 M. Jabłońska , T. Różański , L. Casagrande , H. Shah , P. A. Kołaczek-Szymański , M. Rychlicki , Yuan-Sen Ting

The R package micompr implements a procedure for assessing if two or more multivariate samples are drawn from the same distribution. The procedure uses principal component analysis to convert multivariate observations into a set of linearly…

Mathematical Software · Computer Science 2021-05-11 Nuno Fachada , João Rodrigues , Vitor V. Lopes , Rui C. Martins , Agostinho C. Rosa

Digital images contain a lot of redundancies, therefore, compression techniques are applied to reduce the image size without loss of reasonable image quality. Same become more prominent in the case of videos which contains image sequences…

Computer Vision and Pattern Recognition · Computer Science 2023-05-17 Nisar Ahmed , Hafiz Muhammad Shahzad Asif , Hassan Khalid

Due to their flexibility and superior performance, machine learning models frequently complement and outperform traditional statistical survival models. However, their widespread adoption is hindered by a lack of user-friendly tools to…

This paper presents a new method, called FlexiCurve, for photo enhancement. Unlike most existing methods that perform image-to-image mapping, which requires expensive pixel-wise reconstruction, FlexiCurve takes an input image and estimates…

Computer Vision and Pattern Recognition · Computer Science 2020-10-27 Chongyi Li , Chunle Guo , Qiming Ai , Shangchen Zhou , Chen Change Loy

Microarray technology is still an important way to assess gene expression in molecular biology, mainly because it measures expression profiles for thousands of genes simultaneously, what makes this technology a good option for some studies…

Computation · Statistics 2015-11-12 Gustavo H. Esteves , Roberto Hirata

Computational models can provide significant insight into the operation mechanisms and deficiencies of photovoltaic solar cells. Solcore is a modular set of computational tools, written in Python 3, for the design and simulation of…

Applied Physics · Physics 2018-04-17 D. Alonso-Álvarez , T. Wilson , P. Pearce , M. Führer , D. Farrell , N. Ekins-Daukes

Low-energy electron diffraction (LEED) is a widely used technique in surface-science. Yet, it is rarely used to its full potential. The quantitative information about the surface structure, contained in the modulation of the intensities of…

Current image generation models produce visually compelling but scientifically implausible images, exposing a fundamental gap between visual fidelity and physical realism. In this work, we introduce ScienceT2I, an expert-annotated dataset…

Computer Vision and Pattern Recognition · Computer Science 2026-04-02 Jialuo Li , Wenhao Chai , Xingyu Fu , Haiyang Xu , Saining Xie

Estimating sample size and statistical power is an essential part of a good study design. This R package allows users to conduct power analysis based on Monte Carlo simulations in settings in which consideration of the correlations between…

Methodology · Statistics 2024-04-16 Phuc H. Nguyen , Stephanie M. Engel , Amy H. Herring

Phosphorescent metal complexes have been under intense investigations as emissive dopants for energy efficient organic light emitting diodes (OLEDs). Among them, cyclometalated Pt(II) complexes are widespread triplet emitters with…

Machine Learning · Computer Science 2023-01-16 Shuai Wang , ChiYung Yam , Shuguang Chen , Lihong Hu , Liping Li , Faan-Fung Hung , Jiaqi Fan , Chi-Ming Che , GuanHua Chen

We present a machine learning package for the classification of periodic variable stars. Our package is intended to be general: it can classify any single band optical light curve comprising at least a few tens of observations covering…

Instrumentation and Methods for Astrophysics · Physics 2016-02-17 Dae-Won Kim , Coryn A. L. Bailer-Jones

Rotation curves are a fundamental tool in the study of galaxies across cosmic time, and with the advent of large integral field unit (IFU) kinematic surveys there is an increasing need for efficient and flexible modelling tools. We present…

Research into the processes of photoionised nebulae plays a significant part in our understanding of stellar evolution. It is extremely difficult to visually represent or model ionised nebula, requiring astronomers to employ sophisticated…

Instrumentation and Methods for Astrophysics · Physics 2020-05-26 K. Fitzgerald , E. J Harvey , N. Keaveney , M. Redman
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