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Retrieval-augmented generation (RAG) enhances large language models with external knowledge, and tree-based RAG organizes documents into hierarchical indexes to support queries at multiple granularities. However, existing Tree-RAG methods…

Machine Learning · Computer Science 2026-05-04 Ziwen Zhao , Menglin Yang

With the rising quantity of textual data available in electronic format, the need to organize it become a highly challenging task. In the present paper, we explore a document organization framework that exploits an intelligent hierarchical…

Information Retrieval · Computer Science 2015-04-02 Rajendra Kumar Roul , Shubham Rohan Asthana , Sanjay Kumar Sahay

Scientific paper retrieval, particularly framed as document-to-document retrieval, aims to identify relevant papers in response to a long-form query paper, rather than a short query string. Previous approaches to this task have focused…

Information Retrieval · Computer Science 2026-03-24 Sangwoo Park , Jinheon Baek , Soyeong Jeong , Sung Ju Hwang

Keeping track of the ever-increasing body of scientific literature is an escalating challenge. We present PubTree a hierarchical search tool that efficiently searches the PubMed/MEDLINE dataset based upon a decision tree constructed using…

Information Retrieval · Computer Science 2017-02-28 William Rowe , Paul D. Dobson , Bede Constantinides , Mark Platt

As an effective method to boost the performance of Large Language Models (LLMs) on the question answering (QA) task, Retrieval-Augmented Generation (RAG), which queries highly relevant information from external complex documents, has…

Information Retrieval · Computer Science 2025-12-04 Shu Wang , Yingli Zhou , Yixiang Fang

Substructure search in chemical compound databases is a fundamental task in cheminformatics with critical implications for fields such as drug discovery, materials science, and toxicology. However, the increasing size and complexity of…

Databases · Computer Science 2023-10-04 Vsevolod Vaskin , Dmitri Jakovlev , Fedor Bakharev

Inverted file structure is a common technique for accelerating dense retrieval. It clusters documents based on their embeddings; during searching, it probes nearby clusters w.r.t. an input query and only evaluates documents within them by…

Information Retrieval · Computer Science 2023-10-18 Peitian Zhang , Zheng Liu , Shitao Xiao , Zhicheng Dou , Jing Yao

Academic paper search is an essential task for efficient literature discovery and scientific advancement. While dense retrieval has advanced various ad-hoc searches, it often struggles to match the underlying academic concepts between…

Information Retrieval · Computer Science 2024-10-28 SeongKu Kang , Yunyi Zhang , Pengcheng Jiang , Dongha Lee , Jiawei Han , Hwanjo Yu

The numerical size of academic publications that are being published in recent years had grown rapidly. Accessing and searching massive academic publications that are distributed over several locations need large amount of computing…

Distributed, Parallel, and Cluster Computing · Computer Science 2014-05-27 Mohammed Bakri Bashir , Muhammad Shafie Abd Latiff , Shafii Muhammad Abdulhamid , Cheah Tek Loon

Information retrieval is a core component of many intelligent systems as it enables conditioning of outputs on new and large-scale datasets. While effective, the standard practice of encoding data into high-dimensional representations for…

Information Retrieval · Computer Science 2026-02-16 Shubham Gupta , Zichao Li , Tianyi Chen , Cem Subakan , Siva Reddy , Perouz Taslakian , Valentina Zantedeschi

Scientific knowledge is growing rapidly, making it difficult to track progress and high-level conceptual links across broad disciplines. While tools like citation networks and search engines help retrieve related papers, they lack the…

Computation and Language · Computer Science 2025-10-29 Muhan Gao , Jash Shah , Weiqi Wang , Kuan-Hao Huang , Daniel Khashabi

Recent retrieval-augmented models enhance basic methods by building a hierarchical structure over retrieved text chunks through recursive embedding, clustering, and summarization. The most relevant information is then retrieved from both…

Computation and Language · Computer Science 2024-10-03 Charbel Chucri , Rami Azouz , Joachim Ott

Natural language text corpora are often available as sets of syntactically parsed trees. A wide range of expressive tree queries are possible over such parsed trees that open a new avenue in searching over natural language text. They not…

Databases · Computer Science 2012-08-02 Pirooz Chubak , Davood Rafiei

Bibliometric indexes are customary used in evaluating the impact of scientific research, even though it is very well known that in different research areas they may range in very different intervals. Sometimes, this is evident even within a…

Digital Libraries · Computer Science 2014-03-18 Pierluigi Amodio , Luigi Brugnano

For text retrieval systems, the assumption that all data structures reside in main memory is increasingly common. In this context, we present a novel incremental inverted indexing algorithm for web-scale collections that directly constructs…

Information Retrieval · Computer Science 2013-05-06 Nima Asadi , Jimmy Lin

Spreadsheets are end-user programs and domain models that are heavily employed in administration, financial forecasting, education, and science because of their intuitive, flexible, and direct approach to computation. As a result,…

Databases · Computer Science 2014-01-30 Michael Kohlhase , Corneliu Prodescu , Christian Liguda

Text clustering holds significant value across various domains due to its ability to identify patterns and group related information. Current approaches which rely heavily on a computed similarity measure between documents are often limited…

Information Retrieval · Computer Science 2025-04-09 Laurence Hirsch , Robin Hirsch , Bayode Ogunleye

The quality of machine learning models depends heavily on their training data. Selecting high-quality, diverse training sets for large language models (LLMs) is a difficult task, due to the lack of cheap and reliable quality metrics. While…

Machine Learning · Computer Science 2026-01-30 Robert Istvan Busa-Fekete , Julian Zimmert , Anne Xiangyi Zheng , Claudio Gentile , Andras Gyorgy

Efficiently navigating and understanding academic papers is crucial for scientific progress. Traditional linear formats like PDF and HTML can cause cognitive overload and obscure a paper's hierarchical structure, making it difficult to…

Human-Computer Interaction · Computer Science 2025-07-28 Zijian Zhang , Pan Chen , Fangshi Du , Runlong Ye , Oliver Huang , Michael Liut , Alán Aspuru-Guzik

There has been increased interest in data search as a means to find relevant datasets or data points in data lakes and repositories. Although approaches have been proposed to support spatial dataset search and data point search, they…

Databases · Computer Science 2025-10-28 Wenzhe Yang , Sheng Wang , Shixun Huang , Hao Liu , Yuan Sun , Juliana Freire , Zhiyong Peng
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