English
Related papers

Related papers: Abundance-Aware Set Transformer for Microbiome Sam…

200 papers

Accurate click-through rate (CTR) prediction is vital for online advertising and recommendation systems. Recent deep learning advancements have improved the ability to capture feature interactions and understand user interests. However,…

Information Retrieval · Computer Science 2025-02-24 Kefan Wang , Hao Wang , Kenan Song , Wei Guo , Kai Cheng , Zhi Li , Yong Liu , Defu Lian , Enhong Chen

Sequential recommendation models have achieved state-of-the-art performance using self-attention mechanism. It has since been found that moving beyond only using item ID and positional embeddings leads to a significant accuracy boost when…

Information Retrieval · Computer Science 2024-09-10 Linsey Pang , Amir Hossein Raffiee , Wei Liu , Keld Lundgaard

Gene set collections are a common ground to study the enrichment of genes for specific phenotypic traits. Gene set enrichment analysis aims to identify genes that are over-represented in gene sets collections and might be associated with a…

Genomics · Quantitative Biology 2022-07-26 Chiara Balestra , Carlo Maj , Emmanuel Mueller , Andreas Mayr

Mixture models are often used to identify meaningful subpopulations (i.e., clusters) in observed data such that the subpopulations have a real-world interpretation (e.g., as cell types). However, when used for subpopulation discovery,…

Methodology · Statistics 2024-03-04 Jiawei Li , Jonathan H. Huggins

Large Transformer models yield impressive results on many tasks, but are expensive to train, or even fine-tune, and so slow at decoding that their use and study becomes out of reach. We address this problem by leveraging sparsity. We study…

Multivariate probit models (MPM) have the appealing feature of capturing some of the dependence structure between the components of multidimensional binary responses. The key for the dependence modelling is the covariance matrix of an…

Methodology · Statistics 2013-11-15 Giusi Moffa , Jack Kuipers

We introduce a novel learning-based method for encoding and manipulating 3D surface meshes. Our method is specifically designed to create an interpretable embedding space for deformable shape collections. Unlike previous 3D mesh…

Computer Vision and Pattern Recognition · Computer Science 2023-10-30 Sara Hahner , Souhaib Attaiki , Jochen Garcke , Maks Ovsjanikov

Transformer architectures have facilitated the development of large-scale and general-purpose sequence models for prediction tasks in natural language processing and computer vision, e.g., GPT-3 and Swin Transformer. Although originally…

Machine Learning · Computer Science 2023-06-27 Muning Wen , Runji Lin , Hanjing Wang , Yaodong Yang , Ying Wen , Luo Mai , Jun Wang , Haifeng Zhang , Weinan Zhang

Text embeddings from Large Language Models (LLMs) have become foundational for numerous applications. However, these models typically operate on raw text, overlooking the rich structural information, such as hyperlinks or citations, that…

Machine Learning · Computer Science 2025-10-13 Shikun Liu , Haoyu Wang , Mufei Li , Pan Li

Deep clustering against self-supervised learning is a very important and promising direction for unsupervised visual representation learning since it requires little domain knowledge to design pretext tasks. However, the key component,…

Computer Vision and Pattern Recognition · Computer Science 2020-08-21 Weijie Chen , Shiliang Pu , Di Xie , Shicai Yang , Yilu Guo , Luojun Lin

Ensembling multiple predictions is a widely used technique for improving the accuracy of various machine learning tasks. One obvious drawback of ensembling is its higher execution cost during inference. In this paper, we first describe our…

Machine Learning · Computer Science 2019-03-11 Hiroshi Inoue

Sensitive detection of low-abundance molecular targets is widely assumed to require enzymatic amplification, such as PCR, to achieve low detection limits. In amplification-free platforms, sensitivity is traditionally constrained by…

Soft Condensed Matter · Physics 2026-02-25 Xiuyang Xia , Yuhan Peng , Ran Ni

This paper proposes Transducers with Pronunciation-aware Embeddings (PET). Unlike conventional Transducers where the decoder embeddings for different tokens are trained independently, the PET model's decoder embedding incorporates shared…

Computation and Language · Computer Science 2024-04-09 Hainan Xu , Zhehuai Chen , Fei Jia , Boris Ginsburg

Much of recent Deep Reinforcement Learning success is owed to the neural architecture's potential to learn and use effective internal representations of the world. While many current algorithms access a simulator to train with a large…

Artificial Intelligence · Computer Science 2022-02-03 Amir Ardalan Kalantari , Mohammad Amini , Sarath Chandar , Doina Precup

Sketchformer is a novel transformer-based representation for encoding free-hand sketches input in a vector form, i.e. as a sequence of strokes. Sketchformer effectively addresses multiple tasks: sketch classification, sketch based image…

Computer Vision and Pattern Recognition · Computer Science 2020-02-25 Leo Sampaio Ferraz Ribeiro , Tu Bui , John Collomosse , Moacir Ponti

Autoregressive language models have demonstrated a remarkable ability to extract latent structure from text. The embeddings from large language models have been shown to capture aspects of the syntax and semantics of language. But what…

Machine Learning · Computer Science 2026-01-09 Liyi Zhang , Michael Y. Li , R. Thomas McCoy , Theodore R. Sumers , Jian-Qiao Zhu , Thomas L. Griffiths

Recent work has explored sequence-to-sequence latent variable models for expressive speech synthesis (supporting control and transfer of prosody and style), but has not presented a coherent framework for understanding the trade-offs between…

Computation and Language · Computer Science 2019-10-29 Eric Battenberg , Soroosh Mariooryad , Daisy Stanton , RJ Skerry-Ryan , Matt Shannon , David Kao , Tom Bagby

Modern transformer-based sequential recommenders excel at capturing short-term intent but often suffer from recency bias, overlooking stable long-term preferences. While extending sequence lengths is an intuitive fix, it is computationally…

Machine Learning · Computer Science 2026-04-10 Andrii Dzhoha , Egor Malykh

Transformers have revolutionized machine learning across diverse domains, yet understanding their behavior remains crucial, particularly in high-stakes applications. This paper introduces the contextual counting task, a novel toy problem…

Transformer is eminently suitable for auto-regressive image synthesis which predicts discrete value from the past values recursively to make up full image. Especially, combined with vector quantised latent representation, the…

Computer Vision and Pattern Recognition · Computer Science 2022-10-12 Jonghwa Yim , Minjae Kim
‹ Prev 1 8 9 10 Next ›