Related papers: IBEX: Information-Bottleneck-EXplored Coarse-to-Fi…
Compact neural networks are essential for affordable and power efficient deep learning solutions. Binary Neural Networks (BNNs) take compactification to the extreme by constraining both weights and activations to two levels, $\{+1, -1\}$.…
The training dynamics of hidden layers in deep learning are poorly understood in theory. Recently, the Information Plane (IP) was proposed to analyze them, which is based on the information-theoretic concept of mutual information (MI). The…
The Information Bottleneck method is a learning technique that seeks a right balance between accuracy and generalization capability through a suitable tradeoff between compression complexity, measured by minimum description length, and…
Deep Neural Networks (DNNs) are analyzed via the theoretical framework of the information bottleneck (IB) principle. We first show that any DNN can be quantified by the mutual information between the layers and the input and output…
Deep generative models for structure-based drug design (SBDD), where molecule generation is conditioned on a 3D protein pocket, have received considerable interest in recent years. These methods offer the promise of higher-quality molecule…
Information bottleneck (IB) is a method for extracting information from one random variable $X$ that is relevant for predicting another random variable $Y$. To do so, IB identifies an intermediate "bottleneck" variable $T$ that has low…
Artificial neural networks have successfully tackled a large variety of problems by training extremely deep networks via back-propagation. A direct application of back-propagation to spiking neural networks contains biologically implausible…
Accurate blind docking has the potential to lead to new biological breakthroughs, but for this promise to be realized, docking methods must generalize well across the proteome. Existing benchmarks, however, fail to rigorously assess…
We introduce Concept Bottleneck Protein Language Models (CB-pLM), a generative masked language model with a layer where each neuron corresponds to an interpretable concept. Our architecture offers three key benefits: i) Control: We can…
Structure-Based Drug Design (SBDD) is crucial for identifying bioactive molecules. Recent deep generative models are faced with challenges in geometric structure modeling. A major bottleneck lies in the twisted probability path of…
In the Information Bottleneck (IB), when tuning the relative strength between compression and prediction terms, how do the two terms behave, and what's their relationship with the dataset and the learned representation? In this paper, we…
Deep learning has revolutionized modern society but faces growing energy and latency constraints. Deep physical neural networks (PNNs) are interconnected computing systems that directly exploit analog dynamics for energy-efficient,…
To meet the demands of applications like robotics and autonomous driving that require real-time responses to dynamic environments, efficient continual learning methods suitable for edge devices have attracted increasing attention. In this…
In this paper, we introduce the application of Information Bottleneck as a method to investigate properties of questionnaires developed for the study of motivational profiles based on self-determination theory. Founded on information…
Iterative Bleaching Extends multipleXity (IBEX) is a versatile method for highly multiplexed imaging of diverse tissues. Based on open science principles, we created the IBEX Knowledge-Base, a resource for reagents, protocols and more, to…
We propose a unified information-geometric framework that formalizes understanding in learning as a trade-off between informativeness and geometric simplicity. An encoder phi is evaluated by U(phi) = I(phi(X); Y) - beta * C(phi), where…
Multimodal learning significantly benefits cancer survival prediction, especially the integration of pathological images and genomic data. Despite advantages of multimodal learning for cancer survival prediction, massive redundancy in…
The Information bottleneck method is an unsupervised non-parametric data organization technique. Given a joint distribution P(A,B), this method constructs a new variable T that extracts partitions, or clusters, over the values of A that are…
In this work, we focus on the challenging problem of Label Enhancement (LE), which aims to exactly recover label distributions from logical labels, and present a novel Label Information Bottleneck (LIB) method for LE. For the recovery…
In this paper, we propose Binarized Change Detection (BiCD), the first binary neural network (BNN) designed specifically for change detection. Conventional network binarization approaches, which directly quantize both weights and…