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Graph Neural Networks (GNNs) have demonstrated significant success in learning from graph-structured data across various domains. Despite their great successful, one critical challenge is often overlooked by existing works, i.e., the…

Machine Learning · Computer Science 2024-02-15 Tianxiang Zhao , Xiang Zhang , Suhang Wang

We consider the problem of explaining the predictions of graph neural networks (GNNs), which otherwise are considered as black boxes. Existing methods invariably focus on explaining the importance of graph nodes or edges but ignore the…

Machine Learning · Computer Science 2021-06-02 Hao Yuan , Haiyang Yu , Jie Wang , Kang Li , Shuiwang Ji

In recent years, tasks of machine learning ranging from image processing & audio/video analysis to natural language understanding have been transformed by deep learning. The data content in all these scenarios are expressed via Euclidean…

Machine Learning · Computer Science 2023-11-07 Adil Mudasir Malla , Asif Ali Banka

Graph Neural Networks (GNNs) have emerged as powerful tools for learning representations of graph-structured data, demonstrating remarkable performance across various tasks. Recognising their importance, there has been extensive research…

Machine Learning · Computer Science 2025-01-06 Akshit Sinha , Sreeram Vennam , Charu Sharma , Ponnurangam Kumaraguru

Text classification is fundamental in natural language processing (NLP), and Graph Neural Networks (GNN) are recently applied in this task. However, the existing graph-based works can neither capture the contextual word relationships within…

Computation and Language · Computer Science 2020-05-13 Yufeng Zhang , Xueli Yu , Zeyu Cui , Shu Wu , Zhongzhen Wen , Liang Wang

Temporal graph neural networks (TGNNs) have gained significant traction for solving real-world temporal graph tasks. However, their interpretability remains limited, as most TGNNs fail to identify which historical interactions most…

Machine Learning · Computer Science 2026-05-20 Hongjiang Chen , Xin Zheng , Pengfei Jiao , Huan Liu , Zhidong Zhao , Huaming Wu , Feng Xia , Shirui Pan

A central question in neuroscience is how self-organizing dynamic interactions in the brain emerge on their relatively static structural backbone. Due to the complexity of spatial and temporal dependencies between different brain areas,…

Neurons and Cognition · Quantitative Biology 2020-10-15 Simon Wein , Wilhelm Malloni , Ana Maria Tomé , Sebastian M. Frank , Gina-Isabelle Henze , Stefan Wüst , Mark W. Greenlee , Elmar W. Lang

Graph neural network (GNN) explainers identify the important subgraph that ensures the prediction for a given graph. Until now, almost all GNN explainers are based on association, which is prone to spurious correlations. We propose {\name},…

Machine Learning · Computer Science 2024-07-15 Arman Behnam , Binghui Wang

Aside from graph neural networks (GNNs) attracting significant attention as a powerful framework revolutionizing graph representation learning, there has been an increasing demand for explaining GNN models. Although various explanation…

Machine Learning · Computer Science 2024-03-21 Yong-Min Shin , Sun-Woo Kim , Won-Yong Shin

Progress in graph neural networks has grown rapidly in recent years, with many new developments in drug discovery, medical diagnosis, and recommender systems. While this progress is significant, many networks are `black boxes' with little…

Machine Learning · Computer Science 2023-06-09 Eli Laird , Ayesh Madushanka , Elfi Kraka , Corey Clark

This paper proposes a new eXplanation framework, called OrphicX, for generating causal explanations for any graph neural networks (GNNs) based on learned latent causal factors. Specifically, we construct a distinct generative model and…

Machine Learning · Computer Science 2022-04-12 Wanyu Lin , Hao Lan , Hao Wang , Baochun Li

Graph neural networks (GNNs) are a widely used class of machine learning models for graph-structured data, based on local aggregation over neighbors. GNNs have close connections to logic. In particular, their expressive power is linked to…

Logic in Computer Science · Computer Science 2026-01-30 Arie Soeteman , Michael Benedikt , Martin Grohe , Balder ten Cate

As Graph Neural Networks (GNNs) become more pervasive, it becomes paramount to build reliable tools for explaining their predictions. A core desideratum is that explanations are \textit{faithful}, \ie that they portray an accurate picture…

Machine Learning · Computer Science 2025-04-11 Steve Azzolin , Antonio Longa , Stefano Teso , Andrea Passerini

Recent work has observed that explanations produced by Self-Interpretable Graph Neural Networks (SI-GNNs) can be self-inconsistent: when the model is reapplied to its own explanatory graph subset, it may produce a different explanation.…

Machine Learning · Computer Science 2026-05-11 Wenxin Tai , Yaqian Liu , Ting Zhong , Fan Zhou

As Graph Neural Networks (GNNs) are increasingly being employed in critical real-world applications, several methods have been proposed in recent literature to explain the predictions of these models. However, there has been little to no…

Machine Learning · Computer Science 2022-02-23 Chirag Agarwal , Marinka Zitnik , Himabindu Lakkaraju

Diverse explainability methods of graph neural networks (GNN) have recently been developed to highlight the edges and nodes in the graph that contribute the most to the model predictions. However, it is not clear yet how to evaluate the…

Artificial Intelligence · Computer Science 2023-11-07 Kenza Amara , Mennatallah El-Assady , Rex Ying

As Graph Neural Networks (GNNs) are widely adopted in digital pathology, there is increasing attention to developing explanation models (explainers) of GNNs for improved transparency in clinical decisions. Existing explainers discover an…

Machine Learning · Computer Science 2021-12-21 Junchi Yu , Tingyang Xu , Ran He

2D image understanding is a complex problem within computer vision, but it holds the key to providing human-level scene comprehension. It goes further than identifying the objects in an image, and instead, it attempts to understand the…

Computer Vision and Pattern Recognition · Computer Science 2024-04-15 Henry Senior , Gregory Slabaugh , Shanxin Yuan , Luca Rossi

Convolutional neural network based systems have largely failed to be adopted in many high-risk application areas, including healthcare, military, security, transportation, finance, and legal, due to their highly uninterpretable "black-box"…

Image and Video Processing · Electrical Eng. & Systems 2020-06-23 Rodney LaLonde , Drew Torigian , Ulas Bagci

Despite the recent progress in deep neural networks (DNNs), it remains challenging to explain the predictions made by DNNs. Existing explanation methods for DNNs mainly focus on post-hoc explanations where another explanatory model is…

Machine Learning · Computer Science 2024-01-04 Wei Qian , Chenxu Zhao , Yangyi Li , Fenglong Ma , Chao Zhang , Mengdi Huai