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Related papers: Directed Cycles as Higher-Order Units of Informati…

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Self-organization is the generation of order out of local interactions in non-equilibrium [1]. It is deeply connected to all fields of science from physics, chemistry to biology where functional living structures self-assemble[2] and…

Soft Condensed Matter · Physics 2018-10-24 Utsab Khadka , Viktor Holubec , Haw Yang , Frank Cichos

We consider two-way interference channels (ICs) where forward and backward channels are ICs but not necessarily the same. We first consider a scenario where there are only two forward messages and feedback is offered through the backward IC…

Information Theory · Computer Science 2016-11-17 Changho Suh , I-Hsiang Wang , David Tse

To comprehend the multipartite organization of large-scale biological and social systems, we introduce a new information theoretic approach that reveals community structure in weighted and directed networks. The method decomposes a network…

Physics and Society · Physics 2008-02-13 M. Rosvall , C. T. Bergstrom

Inspired by the prevalence of recurrent circuits in biological brains, we investigate the degree to which directionality is a helpful inductive bias for artificial neural networks. Taking directionality as topologically-ordered information…

Machine Learning · Computer Science 2025-07-22 Yiding Song

We consider possible designs and experimental realiza-tions in synthesized rather than naturally occurring bio-chemical systems of a selection of basic bio-inspired information processing steps. These include feed-forward loops, which have…

Molecular Networks · Quantitative Biology 2015-02-09 Vladimir Privman , Evgeny Katz

The cell cycle is a tightly controlled process, yet its underlying genetic network shows marked differences across species. Which of the associated structural features follow solely from the ability to impose the appropriate gene expression…

Molecular Networks · Quantitative Biology 2015-06-12 M. Zagorski , A. Krzywicki , O. C. Martin

We study directed random graphs (random graphs whose edges are directed) as they evolve in discrete time by the addition of nodes and edges. For two distinct evolution strategies, one that forces the graph to a condition of near acyclicity…

Statistical Mechanics · Physics 2007-05-23 Valmir C. Barbosa , Raul Donangelo , Sergio R. Souza

The performance, reliability, cost, size and energy usage of computing systems can be improved by one or more orders of magnitude by the systematic use of modern control and optimization methods. Computing systems rely on the use of…

Systems and Control · Computer Science 2017-10-13 Eric C. Kerrigan

Cycle is the simplest structure that brings redundant paths in network connectivity and feedback effects in network dynamics. Focusing on cycle structure, this paper defines a new matrix, named cycle number matrix, to represent cycle…

Physics and Society · Physics 2021-04-21 Tianlong Fan , Linyuan Lü , Dinghua Shi , Tao Zhou

The interactions between individuals play a pivotal role in shaping the structure and dynamics of social systems. Complex network models have proven invaluable in uncovering the underlying mechanisms that govern the formation and evolution…

The structure of the majority of modern deep neural networks is characterized by uni- directional feed-forward connectivity across a very large number of layers. By contrast, the architecture of the cortex of vertebrates contains fewer…

Machine Learning · Computer Science 2017-06-23 Sebastian Herzog , Christian Tetzlaff , Florentin Wörgötter

The microscopic organization of dynamical systems coupled via higher-order interactions plays a pivotal role in understanding their collective behavior. In this paper, we introduce a framework for systematically investigating the impact of…

Physics and Society · Physics 2025-01-14 Santiago Lamata-Otín , Federico Malizia , Vito Latora , Mattia Frasca , Jesús Gómez-Gardeñes

Networks are a powerful tool to model the structure and dynamics of complex systems across scales. Direct connections between system components are often represented as edges, while paths and walks capture indirect interactions. This…

Physics and Society · Physics 2025-01-15 Rohit Sahasrabuddhe , Renaud Lambiotte , Martin Rosvall

Higher-order networks, naturally described as hypergraphs, are essential for modeling real-world systems involving interactions among three or more entities. Stochastic block models offer a principled framework for characterizing mesoscale…

Social and Information Networks · Computer Science 2025-11-27 Kazuki Nakajima , Yuya Sasaki , Takeaki Uno , Masaki Aida

Many real-world systems, from social networks to protein-protein interactions and species distributions, exhibit overlapping flow-based communities that reflect their functional organisation. However, reliably identifying such overlapping…

Flexible information routing fundamentally underlies the function of many biological and artificial networks. Yet, how such systems may specifically communicate and dynamically route information is not well understood. Here we identify a…

Adaptation and Self-Organizing Systems · Physics 2016-07-08 Christoph Kirst , Marc Timme , Demian Battaglia

The complexity of many biological, social and technological systems stems from the richness of the interactions among their units. Over the past decades, a great variety of complex systems has been successfully described as networks whose…

To better understand the structure and function of complex systems, researchers often represent direct interactions between components in complex systems with networks, assuming that indirect influence between distant components can be…

Physics and Society · Physics 2018-06-18 Renaud Lambiotte , Martin Rosvall , Ingo Scholtes

The abundant recurrent horizontal and feedback connections in the primate visual cortex are thought to play an important role in bringing global and semantic contextual information to early visual areas during perceptual inference, helping…

Neurons and Cognition · Quantitative Biology 2019-12-24 Siming Yan , Xuyang Fang , Bowen Xiao , Harold Rockwell , Yimeng Zhang , Tai Sing Lee

The co-evolution of structure and dynamics, known as adaptivity, is a fundamental property in various systems and drives diverse emergent behaviors. However, the adaptivity in previous works is primarily stemmed from pairwise situations,…

Physics and Society · Physics 2025-08-22 Longzhao Liu , Hongwei Zheng , Zhihao Han , Xin Wang , Shaoting Tang