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Existing graph contrastive learning (GCL) techniques typically require two forward passes for a single instance to construct the contrastive loss, which is effective for capturing the low-frequency signals of node features. Such a dual-pass…

Machine Learning · Computer Science 2023-11-21 Haonan Wang , Jieyu Zhang , Qi Zhu , Wei Huang , Kenji Kawaguchi , Xiaokui Xiao

Graph Contrastive Learning (GCL) excels at managing noise and fluctuations in input data, making it popular in various fields (e.g., social networks, and knowledge graphs). Our study finds that the difference in high-frequency information…

Machine Learning · Computer Science 2024-10-15 Yuntao Shou , Xiangyong Cao , Deyu Meng

Single-cell RNA sequencing (scRNA-seq) has revolutionized our understanding of cellular processes by enabling gene expression analysis at the individual cell level. Clustering allows for the identification of cell types and the further…

Machine Learning · Computer Science 2025-06-03 Ziwen Wang

Graph representation learning has attracted lots of attention recently. Existing graph neural networks fed with the complete graph data are not scalable due to limited computation and memory costs. Thus, it remains a great challenge to…

Machine Learning · Computer Science 2020-11-24 Yizhu Jiao , Yun Xiong , Jiawei Zhang , Yao Zhang , Tianqi Zhang , Yangyong Zhu

Benefiting from the intrinsic supervision information exploitation capability, contrastive learning has achieved promising performance in the field of deep graph clustering recently. However, we observe that two drawbacks of the positive…

Machine Learning · Computer Science 2023-01-04 Xihong Yang , Yue Liu , Sihang Zhou , Siwei Wang , Wenxuan Tu , Qun Zheng , Xinwang Liu , Liming Fang , En Zhu

Graph matching has important applications in pattern recognition and beyond. Current approaches predominantly adopt supervised learning, demanding extensive labeled data which can be limited or costly. Meanwhile, self-supervised learning…

Machine Learning · Computer Science 2024-06-26 Jianyuan Bo , Yuan Fang

Self-supervised heterogeneous graph learning (SHGL) has shown promising potential in diverse scenarios. However, while existing SHGL methods share a similar essential with clustering approaches, they encounter two significant limitations:…

Artificial Intelligence · Computer Science 2024-12-03 Yujie Mo , Zhihe Lu , Runpeng Yu , Xiaofeng Zhu , Xinchao Wang

Graph Contrastive Learning (GCL) has shown superior performance in representation learning in graph-structured data. Despite their success, most existing GCL methods rely on prefabricated graph augmentation and homophily assumptions. Thus,…

Machine Learning · Computer Science 2024-02-27 Teng Xiao , Huaisheng Zhu , Zhengyu Chen , Suhang Wang

Anomaly detection from graph data has drawn much attention due to its practical significance in many critical applications including cybersecurity, finance, and social networks. Existing data mining and machine learning methods are either…

Machine Learning · Computer Science 2022-01-25 Yu Zheng , Ming Jin , Yixin Liu , Lianhua Chi , Khoa T. Phan , Yi-Ping Phoebe Chen

Accurate cell type annotation across datasets is a key challenge in single-cell analysis. snRNA-seq enables profiling of frozen or difficult-to-dissociate tissues, complementing scRNA-seq by capturing fragile or rare cell types. However,…

Genomics · Quantitative Biology 2026-03-10 Xiran Chen , Quan Zou , Qinyu Cai , Xiaofeng Chen , Weikai Li , Yansu Wang

Spectral-type subspace clustering algorithms have shown excellent performance in many subspace clustering applications. The existing spectral-type subspace clustering algorithms either focus on designing constraints for the reconstruction…

Machine Learning · Computer Science 2023-05-08 Lai Wei , Zhengwei Chen , Jun Yin , Changming Zhu , Rigui Zhou , Jin Liu

Graph classification has gained significant attention due to its applications in chemistry, social networks, and bioinformatics. While Graph Neural Networks (GNNs) effectively capture local structural patterns, they often overlook global…

Machine Learning · Computer Science 2025-12-03 Ahmet Sami Korkmaz , Selim Coskunuzer , Md Joshem Uddin

This work presents a novel approach to tabular data prediction leveraging graph structure learning and graph neural networks. Despite the prevalence of tabular data in real-world applications, traditional deep learning methods often…

Machine Learning · Computer Science 2023-05-26 Jay Chiehen Liao , Cheng-Te Li

Recently, some contrastive learning methods have been proposed to simultaneously learn representations and clustering assignments, achieving significant improvements. However, these methods do not take the category information and…

Computer Vision and Pattern Recognition · Computer Science 2021-04-06 Huasong Zhong , Jianlong Wu , Chong Chen , Jianqiang Huang , Minghua Deng , Liqiang Nie , Zhouchen Lin , Xian-Sheng Hua

Recent advancements in Graph Contrastive Learning (GCL) have demonstrated remarkable effectiveness in improving graph representations. However, relying on predefined augmentations (e.g., node dropping, edge perturbation, attribute masking)…

Machine Learning · Computer Science 2025-02-27 Khaled Mohammed Saifuddin , Shihao Ji , Esra Akbas

Unsupervised graph representation learning aims to learn low-dimensional node embeddings without supervision while preserving graph topological structures and node attributive features. Previous graph neural networks (GNN) require a large…

Machine Learning · Computer Science 2020-09-04 Yanqiao Zhu , Yichen Xu , Feng Yu , Shu Wu , Liang Wang

While contrastive self-supervised learning has become the de-facto learning paradigm for graph neural networks, the pursuit of higher task accuracy requires a larger hidden dimensionality to learn informative and discriminative…

Neural and Evolutionary Computing · Computer Science 2024-02-20 Jintang Li , Huizhe Zhang , Ruofan Wu , Zulun Zhu , Baokun Wang , Changhua Meng , Zibin Zheng , Liang Chen

Graphical models play an important role in neuroscience studies, particularly in brain connectivity analysis. Typically, observations/samples are from several heterogenous groups and the group membership of each observation/sample is…

Methodology · Statistics 2021-10-12 Dong Liu , Changwei Zhao , Yong He , Lei Liu , Ying Guo , Xinsheng Zhang

Spatial transcriptomics clustering is pivotal for identifying cell subpopulations by leveraging spatial location information. While recent graph-based methods modeling cell-cell interactions have improved clustering accuracy, they remain…

Machine Learning · Computer Science 2026-01-21 Chenkai Guo , Yikai Zhu , Renxiang Guan , Jinli Ma , Siwei Wang , Ke Liang , Guangdun Peng , Dayu Hu

Recently, test time adaptation (TTA) has attracted increasing attention due to its power of handling the distribution shift issue in the real world. Unlike what has been developed for convolutional neural networks (CNNs) for image data, TTA…

Machine Learning · Computer Science 2022-08-22 Guanzi Chen , Jiying Zhang , Xi Xiao , Yang Li