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Data augmentation is widely used for training a neural network given little labeled data. A common practice of augmentation training is applying a composition of multiple transformations sequentially to the data. Existing augmentation…

Machine Learning · Computer Science 2024-08-27 Dongyue Li , Kailai Chen , Predrag Radivojac , Hongyang R. Zhang

Scaling regression to large datasets is a common problem in many application areas. We propose a two step approach to scaling regression to large datasets. Using a regression tree (CART) to segment the large dataset constitutes the first…

Machine Learning · Statistics 2017-07-26 Rajiv Sambasivan , Sourish Das

When introducing physics-constrained deep learning solutions to the volumetric super-resolution of scientific data, the training is challenging to converge and always time-consuming. We propose a new hierarchical sampling method based on…

Computational Physics · Physics 2023-06-09 Xinjie Wang , Maoquan Sun , Yundong Guo , Chunxin Yuan , Xiang Sun , Zhiqiang Wei , Xiaogang Jin

We initiate a study of a query-driven approach to designing partition trees for range-searching problems. Our model assumes that a data structure is to be built for an unknown query distribution that we can access through a sampling oracle,…

Data Structures and Algorithms · Computer Science 2025-02-20 Dimitris Fotakis , Andreas Kalavas , Ioannis Psarros

Fixed parameter tractable algorithms for bounded treewidth are known to exist for a wide class of graph optimization problems. While most research in this area has been focused on exact algorithms, it is hard to find decompositions of…

Data Structures and Algorithms · Computer Science 2016-10-05 Thomas Bosman

Several algorithms build on the perfect phylogeny model to infer evolutionary trees. This problem is particularly hard when evolutionary trees are inferred from the fraction of genomes that have mutations in different positions, across…

Data Structures and Algorithms · Computer Science 2018-12-31 Bei Jia , Surjyendu Ray , Sam Safavi , José Bento

Large datasets represented by multidimensional data point clouds often possess non-trivial distributions with branching trajectories and excluded regions, with the recent single-cell transcriptomic studies of developing embryo being notable…

Computing and storing probabilities is a hard problem as soon as one has to deal with complex distributions over multiple random variables. The problem of efficient representation of probability distributions is central in term of…

Artificial Intelligence · Computer Science 2016-08-16 David Bellot , Pierre Bessiere

The Minimum Quartet Tree Cost problem is to construct an optimal weight tree from the $3{n \choose 4}$ weighted quartet topologies on $n$ objects, where optimality means that the summed weight of the embedded quartet topologies is optimal…

Machine Learning · Computer Science 2014-09-16 Rudi L. Cilibrasi , Paul M. B. Vitanyi

State-of-the-art clustering algorithms use heuristics to partition the feature space and provide little insight into the rationale for cluster membership, limiting their interpretability. In healthcare applications, the latter poses a…

Machine Learning · Statistics 2018-12-04 Dimitris Bertsimas , Agni Orfanoudaki , Holly Wiberg

The rise of the Internet of Things and edge computing has shifted computing resources closer to end-users, benefiting numerous delay-sensitive, computation-intensive applications. To speed up computation, distributed computing is a…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-10-10 Ke Ma , Junfei Xie

In order to be able to process the increasing amount of spatial data, efficient methods for their handling need to be developed. One major challenge for big spatial data is access. This can be achieved through space-filling curves, as they…

Data Structures and Algorithms · Computer Science 2019-04-26 Markus Wilhelm Jahn , Patrick Erik Bradley

Merge trees are a valuable tool in the scientific visualization of scalar fields; however, current methods for merge tree comparisons are computationally expensive, primarily due to the exhaustive matching between tree nodes. To address…

Machine Learning · Computer Science 2024-10-07 Yu Qin , Brittany Terese Fasy , Carola Wenk , Brian Summa

In this paper, we present an exact algorithm for the Steiner tree problem. The algorithm is based on certain pre-computed index structures. Our algorithm offers a practical solution for the Steiner tree problems on graphs of large size and…

Data Structures and Algorithms · Computer Science 2013-05-27 Fang Wei-Kleiner

Subgraph counting aims to count occurrences of a template T in a given network G(V, E). It is a powerful graph analysis tool and has found real-world applications in diverse domains. Scaling subgraph counting problems is known to be memory…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-10-06 Langshi Chen , Jiayu Li , Ariful Azad , Cenk Sahinalp , Madhav Marathe , Anil Vullikanti , Andrey Nikolaev , Egor Smirnov , Ruslan Israfilov , Judy Qiu

In deep neural networks, better results can often be obtained by increasing the complexity of previously developed basic models. However, it is unclear whether there is a way to boost performance by decreasing the complexity of such models.…

Machine Learning · Computer Science 2022-06-07 Junran Wu , Shangzhe Li , Jianhao Li , Yicheng Pan , Ke Xu

Designing well-connected graphs is a fundamental problem that frequently arises in various contexts across science and engineering. The weighted number of spanning trees, as a connectivity measure, emerges in numerous problems and plays a…

Data Structures and Algorithms · Computer Science 2016-04-13 Kasra Khosoussi , Gaurav S. Sukhatme , Shoudong Huang , Gamini Dissanayake

We formalize an existing computability-theoretic method of presenting first-order structures whose domains have the cardinality of the continuum. Work using these methods until now has emphasized their topological properties. We shift the…

Logic · Mathematics 2025-11-07 Jason Block , Russell Miller

Suffix trees are one of the most versatile data structures in stringology, with many applications in bioinformatics. Their main drawback is their size, which can be tens of times larger than the input sequence. Much effort has been put into…

Data Structures and Algorithms · Computer Science 2017-12-18 Andrea Farruggia , Travis Gagie , Gonzalo Navarro , Simon J. Puglisi , Jouni Sirén

In this paper, we consider the problem of distributed inference in tree based networks. In the framework considered in this paper, distributed nodes make a 1-bit local decision regarding a phenomenon before sending it to the fusion center…

Information Theory · Computer Science 2016-11-17 Bhavya Kailkhura , Aditya Vempaty , Pramod K. Varshney
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