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We give bounds for dimension 0 persistent homology and codimension 1 homology of Vietoris--Rips, alpha, and cubical complex filtrations from finite sets related by enrichment (adding new elements), sparsification (removing elements), and…

Algebraic Topology · Mathematics 2025-12-05 Jānis Lazovskis , Ran Levi , Juliano Morimoto

We develop topological methods for analyzing difference topology experiments involving 3-string tangles. Difference topology is a novel technique used to unveil the structure of stable protein-DNA complexes involving two or more DNA…

Geometric Topology · Mathematics 2016-01-20 Isabel K. Darcy , John Luecke , Mariel Vazquez

We prove that a weak equivalence between two cofibrant (colored) props in chain complexes induces a Dwyer-Kan equivalence between the simplicial localizations of the associated categories of algebras. This homotopy invariance under base…

Algebraic Topology · Mathematics 2014-05-05 Sinan Yalin

We study a natural generalization of the noncrossing relation between pairs of elements in [n] to k-tuples in [n] that was first considered by Petersen, Pylyavskyy, Speyer (2010). We give an alternative approach to their result that the…

Combinatorics · Mathematics 2017-02-23 Francisco Santos , Christian Stump , Volkmar Welker

Topological data analysis can extract effective information from higher-dimensional data. Its mathematical basis is persistent homology. The persistent homology can calculate topological features at different spatiotemporal scales of the…

Algebraic Topology · Mathematics 2023-09-29 Dinghua Shi , Zhifeng Chen , Chuang Ma , Guanrong Chen

In a region R consisting of unit squares, a (domino) tiling is a collection of dominoes (the union of two adjacent squares) which pave fully the region. The flip graph of R is defined on the set of all tilings of R where two tilings are…

Combinatorics · Mathematics 2025-01-16 Qianqian Liu , Yaxian Zhang , Heping Zhang

Let $r$ be a positive integer. An $r$-set is a pair $X= (V(X),R(X))$ consisting of a set $V(X)$ with a subset $R(X)$ of the direct product $V(X)^r$. The object of this paper is to investigate the Hom complexes of $r$-sets, which were…

Algebraic Topology · Mathematics 2016-04-20 Takahiro Matsushita

Simplicial complexes are gaining increasing scientific attention as they are generalized network structures that can represent the many-body interactions existing in complex systems raging from the brain to high-order social networks.…

Disordered Systems and Neural Networks · Physics 2020-07-15 Hanlin Sun , Robert M. Ziff , Ginestra Bianconi

We show the existence of an MA-complete homology problem for a certain subclass of simplicial complexes. The problem is defined through a new concept of orientability of simplicial complexes that we call a "uniform orientable filtration",…

Quantum Physics · Physics 2025-10-09 Ryu Hayakawa , Casper Gyurik , Mahtab Yaghubi Rad , Vedran Dunjko

The two parameter Poisson-Dirichlet Process (PDP), a generalisation of the Dirichlet Process, is increasingly being used for probabilistic modelling in discrete areas such as language technology, bioinformatics, and image analysis. There is…

Statistics Theory · Mathematics 2012-02-17 Wray Buntine , Marcus Hutter

In this work we use Hodge theoretic methods to study homotopy types of complex projective manifolds with arbitrary fundamental groups. The main tool we use is the \textit{schematization functor} $X \mapsto (X\otimes \mathbb{C})^{sch}$,…

Algebraic Geometry · Mathematics 2014-01-14 L. Katzarkov , T. Pantev , B. Toen

We generalize some homotopy calculation techniques such as splittings and matching trees that are introduced for the computations in the case of the independence complexes of graphs to arbitrary simplicial complexes, and exemplify their…

Combinatorics · Mathematics 2015-01-28 Demet Taylan

In this paper we prove strong toroidalization of birational morphisms of 3-folds. Suppose that f:X\to Y is a birational morphism of nonsingular complete 3-folds, and D_Y, D_X are simple normal crossings divisors on Y and X such that…

Algebraic Geometry · Mathematics 2007-05-23 Steven Dale Cutkosky

The dimer model is the study of random dimer covers (perfect matchings) of a graph. A double-dimer configuration on a graph $G$ is a union of two dimer covers of $G$. We introduce quaternion weights in the dimer model and show how they can…

Probability · Mathematics 2015-03-19 Richard Kenyon

Computing the state-space topology of a dynamical system from scalar data requires accurate reconstruction of those dynamics and construction of an appropriate simplicial complex from the results. The reconstruction process involves a…

Dynamical Systems · Mathematics 2016-10-12 Joshua Garland , Elizabeth Bradley , James D. Meiss

Two DGAs are called topologically equivalent if the corresponding Eilenberg-Mac Lane ring spectra are weakly equivalent as ring spectra. Quasi-isomorphic DGAs are topologically equivalent but the converse is not necessarily true. As a…

Algebraic Topology · Mathematics 2018-06-14 Haldun Ozgur Bayindir

The realization problem asks: When does an algebraic complex arise, up to homotopy, from a geometric complex? In the case of 2- dimensional algebraic complexes, this is equivalent to the D2 problem, which asks when homological methods can…

Algebraic Topology · Mathematics 2023-12-22 Wajid Mannan

We outline a novel clustering scheme for simplicial complexes that produces clusters of simplices in a way that is sensitive to the homology of the complex. The method is inspired by, and can be seen as a higher-dimensional version of,…

Machine Learning · Computer Science 2020-06-23 Stefania Ebli , Gard Spreemann

Given a hypergraph $\mathcal{H}$, the dual hypergraph of $\mathcal{H}$ is the hypergraph of all minimal transversals of $\mathcal{H}$. The dual hypergraph is always Sperner, that is, no hyperedge contains another. A special case of Sperner…

Combinatorics · Mathematics 2024-05-13 Endre Boros , Vladimir Gurvich , Martin Milanič , Yushi Uno

A subcomplex $\mathcal{X}$ of a cell complex $\mathcal{C}$ is called \emph{rigid} with respect to another cell complex $\mathcal{C}'$ if every injective simplicial map $\lambda:\mathcal{X} \rightarrow \mathcal{C}'$ has a unique extension to…

Geometric Topology · Mathematics 2025-02-14 Chandrika Sadanand , Emily Shinkle
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