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Dimensionality reduction is crucial both for visualization and preprocessing high dimensional data for machine learning. We introduce a novel method based on a hierarchy built on 1-nearest neighbor graphs in the original space which is used…

Computer Vision and Pattern Recognition · Computer Science 2022-05-31 M. Saquib Sarfraz , Marios Koulakis , Constantin Seibold , Rainer Stiefelhagen

The enormous amount of data to be represented using large graphs exceeds in some cases the resources of a conventional computer. Edges in particular can take up a considerable amount of memory as compared to the number of nodes. However,…

Artificial Intelligence · Computer Science 2023-12-18 Faisal N. Abu-Khzam , Rana H. Mouawi , Amer Hajj Ahmad , Sergio Thoumi

There has been significant recent interest in graph-based nearest neighbor search methods, many of which are centered on the construction of navigable graphs over high-dimensional point sets. A graph is navigable if we can successfully move…

Data Structures and Algorithms · Computer Science 2025-03-18 Haya Diwan , Jinrui Gou , Cameron Musco , Christopher Musco , Torsten Suel

Constructing latent vector representation for nodes in a network through embedding models has shown its practicality in many graph analysis applications, such as node classification, clustering, and link prediction. However, despite the…

Human-Computer Interaction · Computer Science 2018-08-29 Quan Li , Kristanto Sean Njotoprawiro , Hammad Haleem , Qiaoan Chen , Chris Yi , Xiaojuan Ma

Low-dimensional embeddings and visualizations are an indispensable tool for analysis of high-dimensional data. State-of-the-art methods, such as tSNE and UMAP, excel in unveiling local structures hidden in high-dimensional data and are…

Machine Learning · Computer Science 2023-02-01 Jonas Fischer , Rebekka Burkholz , Jilles Vreeken

Finding patterns in graphs is a fundamental problem in databases and data mining. In many applications, graphs are temporal and evolve over time, so we are interested in finding durable patterns, such as triangles and paths, which persist…

Databases · Computer Science 2024-03-26 Pankaj K. Agarwal , Xiao Hu , Stavros Sintos , Jun Yang

Statistical analysis of a graph often starts with embedding, the process of representing its nodes as points in space. How to choose the embedding dimension is a nuanced decision in practice, but in theory a notion of true dimension is…

Machine Learning · Statistics 2021-01-06 Patrick Rubin-Delanchy

To perform visual data exploration, many dimensionality reduction methods have been developed. These tools allow data analysts to represent multidimensional data in a 2D or 3D space, while preserving as much relevant information as…

Computer Vision and Pattern Recognition · Computer Science 2020-02-20 Benoît Colange , Laurent Vuillon , Sylvain Lespinats , Denys Dutykh

The persistence diagram (PD) is an increasingly popular topological descriptor. By encoding the size and prominence of topological features at varying scales, the PD provides important geometric and topological information about a space.…

Graph embedding methods are becoming increasingly popular in the machine learning community, where they are widely used for tasks such as node classification and link prediction. Embedding graphs in geometric spaces should aid the…

Graph representation learning (also called graph embeddings) is a popular technique for incorporating network structure into machine learning models. Unsupervised graph embedding methods aim to capture graph structure by learning a…

Social and Information Networks · Computer Science 2022-01-24 Andrew Stolman , Caleb Levy , C. Seshadhri , Aneesh Sharma

Understanding the global organization of complicated and high dimensional data is of primary interest for many branches of applied sciences. It is typically achieved by applying dimensionality reduction techniques mapping the considered…

Computational Geometry · Computer Science 2024-11-11 Paweł Dłotko , Davide Gurnari , Mathis Hallier , Anna Jurek-Loughrey

Data visualisation helps understanding data represented by multiple variables, also called features, stored in a large matrix where individuals are stored in lines and variable values in columns. These data structures are frequently called…

Human-Computer Interaction · Computer Science 2022-07-25 Haseeb Younis , Paul Trust , Rosane Minghim

Visualizing very large matrices involves many formidable problems. Various popular solutions to these problems involve sampling, clustering, projection, or feature selection to reduce the size and complexity of the original task. An…

Human-Computer Interaction · Computer Science 2022-06-06 Leland Wilkinson , Hengrui Luo

Given an $n \times d$ dimensional dataset $A$, a projection query specifies a subset $C \subseteq [d]$ of columns which yields a new $n \times |C|$ array. We study the space complexity of computing data analysis functions over such…

Data Structures and Algorithms · Computer Science 2021-01-20 Graham Cormode , Charlie Dickens , David P. Woodruff

In the advent of big data era, interactive visualization of large data sets consisting of M*10^5+ high-dimensional feature vectors of length N (N ~ 10^3+), is an indispensable tool for data exploratory analysis. The state-of-the-art data…

Machine Learning · Computer Science 2019-02-05 Witold Dzwinel , Rafal Wcislo , Stan Matwin

Partitionings (or segmentations) divide a given domain into disjoint connected regions whose union forms again the entire domain. Multi-dimensional partitionings occur, for example, when analyzing parameter spaces of simulation models,…

Human-Computer Interaction · Computer Science 2024-10-28 Marina Evers , Lars Linsen

Graph-Laplacians and their spectral embeddings play an important role in multiple areas of machine learning. This paper is focused on graph-Laplacian dimension reduction for the spectral clustering of data as a primary application. Spectral…

Machine Learning · Computer Science 2021-09-08 Vladimir Druskin , Alexander V. Mamonov , Mikhail Zaslavsky

Stochastic Neighbor Embedding (SNE) algorithms like UMAP and tSNE often produce visualizations that do not preserve the geometry of noisy and high dimensional data. In particular, they can spuriously separate connected components of the…

Machine Learning · Computer Science 2025-09-05 Tristan Luca Saidi , Abigail Hickok , Bastian Rieck , Andrew J. Blumberg

Data visualization is the process by which data of any size or dimensionality is processed to produce an understandable set of data in a lower dimensionality, allowing it to be manipulated and understood more easily by people. The goal of…

Graphics · Computer Science 2021-07-06 Alexander Kiefer , Md. Khaledur Rahman