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Large Language Models (LLMs) demonstrate remarkable versatility in various NLP tasks but encounter distinct challenges in biomedical due to the complexities of language and data scarcity. This paper investigates LLMs application in the…

Computation and Language · Computer Science 2024-07-12 Masoud Monajatipoor , Jiaxin Yang , Joel Stremmel , Melika Emami , Fazlolah Mohaghegh , Mozhdeh Rouhsedaghat , Kai-Wei Chang

Named Entity Recognition (NER) in the rare disease domain poses unique challenges due to limited labeled data, semantic ambiguity between entity types, and long-tail distributions. In this study, we evaluate the capabilities of GPT-4o for…

Computation and Language · Computer Science 2025-12-30 Nan Miles Xi , Yu Deng , Lin Wang

Large language models (LLMs) have become the preferred solution for many natural language processing tasks. In low-resource environments such as specialized domains, their few-shot capabilities are expected to deliver high performance.…

Computation and Language · Computer Science 2024-10-10 Marco Naguib , Xavier Tannier , Aurélie Névéol

Objective: Clinical documentation contains factual, diagnostic, and management errors that can compromise patient safety. Large language models (LLMs) may help detect and correct such errors, but their behavior under different prompting…

Computation and Language · Computer Science 2025-11-27 Farzad Ahmed , Joniel Augustine Jerome , Meliha Yetisgen , Özlem Uzuner

This paper evaluates Few-Shot Prompting with Large Language Models for Named Entity Recognition (NER). Traditional NER systems rely on extensive labeled datasets, which are costly and time-consuming to obtain. Few-Shot Prompting or…

Information Retrieval · Computer Science 2024-09-05 Hédi Zeghidi , Ludovic Moncla

Large language models (LLMs) have shown remarkable performance on many tasks in different domains. However, their performance in closed-book biomedical machine reading comprehension (MRC) has not been evaluated in depth. In this work, we…

Computation and Language · Computer Science 2024-10-28 Shubham Vatsal , Ayush Singh

Retrieval Augmented Generation (RAG) is a powerful approach for enhancing the factual grounding of language models by integrating external knowledge. While widely studied for large language models, the optimization of RAG for Small Language…

Computation and Language · Computer Science 2026-02-17 Amir Hossein Mohammadi , Ali Moeinian , Zahra Razavizade , Afsaneh Fatemi , Reza Ramezani

Causality detection and mining are important tasks in information retrieval due to their enormous use in information extraction, and knowledge graph construction. To solve these tasks, in existing literature there exist several solutions --…

Computation and Language · Computer Science 2025-06-02 Thushara Manjari Naduvilakandy , Hyeju Jang , Mohammad Al Hasan

Large Language Models (LLMs) achieve strong performance across diverse tasks, but their effectiveness often depends on the quality of the provided context. Retrieval-Augmented Generation (RAG) enriches prompts with external information, but…

Computation and Language · Computer Science 2025-10-02 Oussama Gabouj , Kamel Charaf , Ivan Zakazov , Nicolas Baldwin , Robert West

In a surprising turn, Large Language Models (LLMs) together with a growing arsenal of prompt-based heuristics now offer powerful off-the-shelf approaches providing few-shot solutions to myriad classic NLP problems. However, despite…

Computation and Language · Computer Science 2023-06-21 Dhananjay Ashok , Zachary C. Lipton

The robustness of large language models (LLMs) becomes increasingly important as their use rapidly grows in a wide range of domains. Retrieval-Augmented Generation (RAG) is considered as a means to improve the trustworthiness of text…

Computation and Language · Computer Science 2025-05-22 Zhibo Hu , Chen Wang , Yanfeng Shu , Helen , Paik , Liming Zhu

Objective: To optimize in-context learning in biomedical natural language processing by improving example selection. Methods: We introduce a novel multi-mode retrieval-augmented generation (MMRAG) framework, which integrates four retrieval…

Computation and Language · Computer Science 2025-02-25 Zaifu Zhan , Jun Wang , Shuang Zhou , Jiawen Deng , Rui Zhang

The emergent abilities of large language models (LLMs) have demonstrated great potential in solving medical questions. They can possess considerable medical knowledge, but may still hallucinate and are inflexible in the knowledge updates.…

Computation and Language · Computer Science 2024-10-14 Guangzhi Xiong , Qiao Jin , Xiao Wang , Minjia Zhang , Zhiyong Lu , Aidong Zhang

Large Language Models (LLMs) have provided a new pathway for Named Entity Recognition (NER) tasks. Compared with fine-tuning, LLM-powered prompting methods avoid the need for training, conserve substantial computational resources, and rely…

Computation and Language · Computer Science 2025-04-02 Yongjian Tang , Rakebul Hasan , Thomas Runkler

Retrieval-Augmented Generation (RAG) has recently emerged as a method to extend beyond the pre-trained knowledge of Large Language Models by augmenting the original prompt with relevant passages or documents retrieved by an Information…

Named entity recognition (NER) is a fundamental task in numerous downstream applications. Recently, researchers have employed pre-trained language models (PLMs) and large language models (LLMs) to address this task. However, fully…

Computation and Language · Computer Science 2025-10-30 Yufei Zhao , Xiaoshi Zhong , Erik Cambria , Jagath C. Rajapakse

Few-shot named entity recognition (NER) targets generalizing to unseen labels and/or domains with few labeled examples. Existing metric learning methods compute token-level similarities between query and support sets, but are not able to…

Computation and Language · Computer Science 2022-11-09 Yanru Chen , Yanan Zheng , Zhilin Yang

Retrieval-Augmented Generation (RAG) has recently demonstrated the performance of Large Language Models (LLMs) in the knowledge-intensive tasks such as Question-Answering (QA). RAG expands the query context by incorporating external…

Machine Learning · Computer Science 2024-06-18 Zijian Hei , Weiling Liu , Wenjie Ou , Juyi Qiao , Junming Jiao , Guowen Song , Ting Tian , Yi Lin

Large Language Models (LLMs) have swiftly emerged as vital resources for different applications in the biomedical and healthcare domains; however, these models encounter issues such as generating inaccurate information or hallucinations.…

Computation and Language · Computer Science 2024-05-06 Mingchen Li , Halil Kilicoglu , Hua Xu , Rui Zhang

Large language models (LLMs) have demonstrated strong capabilities in medical question answering; however, purely parametric models often suffer from knowledge gaps and limited factual grounding. Retrieval-augmented generation (RAG)…

Computation and Language · Computer Science 2026-04-09 Nusrat Sultana , Abdullah Muhammad Moosa , Kazi Afzalur Rahman , Sajal Chandra Banik
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