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To enhance the reliability and credibility of graph neural networks (GNNs) and improve the transparency of their decision logic, a new field of explainability of GNNs (XGNN) has emerged. However, two major limitations severely degrade the…

Machine Learning · Computer Science 2025-05-26 Han Zhang , Yan Wang , Guanfeng Liu , Pengfei Ding , Huaxiong Wang , Kwok-Yan Lam

While deep neural networks have led to major advances in image recognition, language translation, data mining, and game playing, there are well-known limits to the paradigm such as lack of explainability, difficulty of incorporating prior…

Artificial Intelligence · Computer Science 2023-02-24 Paulo Shakarian , Gerardo I. Simari

Knowledge graphs, modeling multi-relational data, improve numerous applications such as question answering or graph logical reasoning. Many graph neural networks for such data emerged recently, often outperforming shallow architectures.…

Machine Learning · Computer Science 2022-12-01 Pablo Barcelo , Mikhail Galkin , Christopher Morris , Miguel Romero Orth

Message-passing Graph Neural Networks (GNNs) are often criticized for their limited expressiveness, issues like over-smoothing and over-squashing, and challenges in capturing long-range dependencies. Conversely, Graph Transformers (GTs) are…

Machine Learning · Computer Science 2025-11-04 Yuankai Luo , Lei Shi , Xiao-Ming Wu

As the performance of computer systems stagnates due to the end of Moore's Law, there is a need for new models that can understand and optimize the execution of general purpose code. While there is a growing body of work on using Graph…

Machine Learning · Computer Science 2020-03-12 Zhan Shi , Kevin Swersky , Daniel Tarlow , Parthasarathy Ranganathan , Milad Hashemi

Graph Convolutional Networks (GCNs) have been drawing significant attention with the power of representation learning on graphs. Unlike Convolutional Neural Networks (CNNs), which are able to take advantage of stacking very deep layers,…

Machine Learning · Computer Science 2020-06-16 Guohao Li , Chenxin Xiong , Ali Thabet , Bernard Ghanem

While graph kernels (GKs) are easy to train and enjoy provable theoretical guarantees, their practical performances are limited by their expressive power, as the kernel function often depends on hand-crafted combinatorial features of…

Machine Learning · Computer Science 2019-11-05 Simon S. Du , Kangcheng Hou , Barnabás Póczos , Ruslan Salakhutdinov , Ruosong Wang , Keyulu Xu

We demonstrate a declarative differentiable programming framework based on the language of Lifted Relational Neural Networks, where small parameterized logic programs are used to encode relational learning scenarios. When presented with…

Machine Learning · Computer Science 2021-10-22 Gustav Sourek , Filip Zelezny , Ondrej Kuzelka

While Graph Neural Networks (GNNs) recently became powerful tools in graph learning tasks, considerable efforts have been spent on improving GNNs' structural encoding ability. A particular line of work proposed subgraph GNNs that use…

Machine Learning · Computer Science 2023-10-31 Lecheng Kong , Jiarui Feng , Hao Liu , Dacheng Tao , Yixin Chen , Muhan Zhang

The expressive power of graph neural network formalisms is commonly measured by their ability to distinguish graphs. For many formalisms, the k-dimensional Weisfeiler-Leman (k-WL) graph isomorphism test is used as a yardstick. In this paper…

Machine Learning · Computer Science 2020-07-24 Floris Geerts

Graph neural networks (GNNs) have various practical applications, such as drug discovery, recommendation engines, and chip design. However, GNNs lack transparency as they cannot provide understandable explanations for their predictions. To…

Machine Learning · Computer Science 2023-06-09 Samidha Verma , Burouj Armgaan , Sourav Medya , Sayan Ranu

As integrated circuit scale grows and design complexity rises, effective circuit representation helps support logic synthesis, formal verification, and other automated processes in electronic design automation. And-Inverter Graphs (AIGs),…

Machine Learning · Computer Science 2025-06-10 Qiyun Zhao

Despite a growing literature on explaining neural networks, no consensus has been reached on how to explain a neural network decision or how to evaluate an explanation. Our contributions in this paper are twofold. First, we investigate…

Machine Learning · Computer Science 2020-03-23 Laura Rieger , Lars Kai Hansen

We investigate the power of message-passing neural networks (MPNNs) in their capacity to transform the numerical features stored in the nodes of their input graphs. Our focus is on global expressive power, uniformly over all input graphs,…

Artificial Intelligence · Computer Science 2022-07-29 Floris Geerts , Jasper Steegmans , Jan Van den Bussche

Inquisitive team logic is a variant of inquisitive logic interpreted in team semantics, which has been argued to provide a natural setting for the regimentation of dependence claims. With respect to sentences, this logic is known to be…

Logic · Mathematics 2026-03-10 Juha Kontinen , Ivano Ciardelli

Inspired by distributed algorithms, we introduce a new class of finite graph automata that recognize precisely the graph languages definable in monadic second-order logic. For the cases of words and trees, it has been long known that the…

Formal Languages and Automata Theory · Computer Science 2014-04-28 Fabian Reiter

Graph Neural Networks (GNNs) are exemplary deep models designed for graph data. Message passing mechanism enables GNNs to effectively capture graph topology and push the performance boundaries across various graph tasks. However, the trend…

Neural and Evolutionary Computing · Computer Science 2025-09-29 Huizhe Zhang , Jintang Li , Yuchang Zhu , Liang Chen , Li Kuang

Recent years have witnessed the great success of deep neural networks in many research areas. The fundamental idea behind the design of most neural networks is to learn similarity patterns from data for prediction and inference, which lacks…

Artificial Intelligence · Computer Science 2019-10-22 Shaoyun Shi , Hanxiong Chen , Min Zhang , Yongfeng Zhang

Relational Graph Neural Networks (R-GNNs) are a GNN-based approach for learning value functions that can generalise to unseen problems from a given planning domain. R-GNNs were theoretically motivated by the well known connection between…

Artificial Intelligence · Computer Science 2025-06-16 Dillon Z. Chen

Graph generation poses a significant challenge as it involves predicting a complete graph with multiple nodes and edges based on simply a given label. This task also carries fundamental importance to numerous real-world applications,…

Machine Learning · Computer Science 2024-02-21 Xiandong Zou , Xiangyu Zhao , Pietro Liò , Yiren Zhao