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We consider the approximate pattern matching problem under the edit distance. Given a text $T$ of length $n$, a pattern $P$ of length $m$, and a threshold $k$, the task is to find the starting positions of all substrings of $T$ that can be…

Data Structures and Algorithms · Computer Science 2022-04-08 Panagiotis Charalampopoulos , Tomasz Kociumaka , Philip Wellnitz

Let $t$ be a permutation (that shall play the role of the {\em text}) on $[n]$ and a pattern $p$ be a sequence of $m$ distinct integer(s) of $[n]$, $m\leq n$. The pattern $p$ occurs in $t$ in position $i$ if and only if $p_1... p_m$ is…

Data Structures and Algorithms · Computer Science 2013-04-29 Djamal Belazzougui , Adeline Pierrot , Mathieu Raffinot , Stéphane Vialette

The problem of finding factors of a text string which are identical or similar to a given pattern string is a central problem in computer science. A generalised version of this problem consists in implementing an index over the text to…

Data Structures and Algorithms · Computer Science 2016-02-04 Carl Barton , Tomasz Kociumaka , Solon P. Pissis , Jakub Radoszewski

Strings form a fundamental data type in computer systems. String searching has been extensively studied since the inception of computer science. Increasingly many applications have to deal with imprecise strings or strings with fuzzy…

Databases · Computer Science 2015-09-30 Sharma V. Thankachan , Manish Patil , Rahul Shah , Sudip Biswas

Efficient pattern matching is fundamental for practical term rewrite engines. By preprocessing the given patterns into a finite deterministic automaton the matching patterns can be decided in a single traversal of the relevant parts of the…

Logic in Computer Science · Computer Science 2023-06-22 Rick Erkens , Maurice Laveaux

Strings in the real world are often encoded with some level of uncertainty. In the character-level uncertainty model, an uncertain string $X$ of length $n$ on an alphabet $\Sigma$ is a sequence of $n$ probability distributions over…

Data Structures and Algorithms · Computer Science 2024-03-22 Esteban Gabory , Chang Liu , Grigorios Loukides , Solon P. Pissis , Wiktor Zuba

We introduce fast-decodable indexing schemes for edit distance which can be used to speed up edit distance computations to near-linear time if one of the strings is indexed by an indexing string $I$. In particular, for every length $n$ and…

Data Structures and Algorithms · Computer Science 2019-04-11 Bernhard Haeupler , Aviad Rubinstein , Amirbehshad Shahrasbi

Text indexing, the problem in which one desires to preprocess a (usually large) text for future (shorter) queries, has been researched ever since the suffix tree was invented in the early 70's. With textual data continuing to increase and…

Data Structures and Algorithms · Computer Science 2017-01-08 Moshe Lewenstein

Given a pattern $P$ and a text $T$, both strings over a binary alphabet, the binary jumbled string matching problem consists in telling whether any permutation of $P$ occurs in $T$. The indexed version of this problem, i.e., preprocessing a…

Data Structures and Algorithms · Computer Science 2013-05-09 Emanuele Giaquinta , Szymon Grabowski

The problem of approximate string matching is important in many different areas such as computational biology, text processing and pattern recognition. A great effort has been made to design efficient algorithms addressing several variants…

Data Structures and Algorithms · Computer Science 2008-07-29 Dimitris Papamichail , Georgios Papamichail

Frequent pattern mining is a flagship problem in data mining. In its most basic form, it asks for the set of substrings of a given string $S$ of length $n$ that occur at least $\tau$ times in $S$, for some integer $\tau\in[1,n]$. We…

Data Structures and Algorithms · Computer Science 2025-06-06 Pengxin Bian , Panagiotis Charalampopoulos , Lorraine A. K. Ayad , Manal Mohamed , Solon P. Pissis , Grigorios Loukides

The Binary Jumbled String Matching problem is defined as: Given a string $s$ over $\{a,b\}$ of length $n$ and a query $(x,y)$, with $x,y$ non-negative integers, decide whether $s$ has a substring $t$ with exactly $x$ $a$'s and $y$ $b$'s.…

Data Structures and Algorithms · Computer Science 2013-06-03 Golnaz Badkobeh , Gabriele Fici , Steve Kroon , Zsuzsanna Lipták

Text revision refers to a family of natural language generation tasks, where the source and target sequences share moderate resemblance in surface form but differentiate in attributes, such as text formality and simplicity. Current…

Computation and Language · Computer Science 2022-04-18 Jingjing Li , Zichao Li , Tao Ge , Irwin King , Michael R. Lyu

The Suffix Array is a classic text index enabling on-line pattern matching queries via simple binary search. The main drawback of the Suffix Array is that it takes linear space in the text's length, even if the text itself is extremely…

Data Structures and Algorithms · Computer Science 2025-03-19 Davide Cenzato , Lore Depuydt , Travis Gagie , Sung-Hwan Kim , Giovanni Manzini , Francisco Olivares , Nicola Prezza

The binary string matching problem consists in finding all the occurrences of a pattern in a text where both strings are built on a binary alphabet. This is an interesting problem in computer science, since binary data are omnipresent in…

Data Structures and Algorithms · Computer Science 2008-10-15 Simone Faro , Thierry Lecroq

A longest repeat query on a string, motivated by its applications in many subfields including computational biology, asks for the longest repetitive substring(s) covering a particular string position (point query). In this paper, we extend…

Data Structures and Algorithms · Computer Science 2015-11-10 Bojian Xu

Sequential editing of structured knowledge in large language models allows targeted factual updates without retraining, yet existing methods often rely on complex regularization or constraint mechanisms whose necessity remains unclear. In…

Computation and Language · Computer Science 2026-05-27 Zheng Wang , Kaixuan Zhang , Wanfang Chen , Jingwen Zhang , Xiaonan Lu

Text indexing is a classical algorithmic problem that has been studied for over four decades: given a text $T$, pre-process it off-line so that, later, we can quickly count and locate the occurrences of any string (the query pattern) in $T$…

Data Structures and Algorithms · Computer Science 2020-12-15 Nicola Prezza

This paper addresses the online exact string matching problem which consists in finding all occurrences of a given pattern p in a text t. It is an extensively studied problem in computer science, mainly due to its direct applications to…

Data Structures and Algorithms · Computer Science 2010-12-14 Simone Faro , Thierry Lecroq

Given a set of pattern strings $\mathcal{P}=\{P_1, P_2,\ldots P_k\}$ and a text string $S$, the classic dictionary matching problem is to report all occurrences of each pattern in $S$. We study the dictionary problem in the compressed…

Data Structures and Algorithms · Computer Science 2025-09-04 Philip Bille , Inge Li Gørtz , Simon J. Puglisi , Simon R. Tarnow