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DNA constructs and their annotated sequence maps have been rapidly accumulating with the advancement of DNA cloning, synthesis, and assembly methods. Such a resource has the potential to be optimally utilized in an autonomous DNA building…

Quantitative Methods · Quantitative Biology 2021-12-01 Hideto Mori , Nozomu Yachie

Many generative foundation models (or GFMs) are trained on publicly available data and use public infrastructure, but 1) may degrade the "digital commons" that they depend on, and 2) do not have processes in place to return value captured…

Computers and Society · Computer Science 2023-03-21 Saffron Huang , Divya Siddarth

The development of a knowledge repository for climate science data is a multidisciplinary effort between the domain experts (climate scientists), data engineers whos skills include design and building a knowledge repository, and machine…

Digital Libraries · Computer Science 2023-04-13 Mark Roantree , Branislava Lalic , Stevan Savic , Dragan Milosevic , Michael Scriney

Limited data access is a longstanding barrier to data-driven research and development in the networked systems community. In this work, we explore if and how generative adversarial networks (GANs) can be used to incentivize data sharing by…

Machine Learning · Computer Science 2021-01-19 Zinan Lin , Alankar Jain , Chen Wang , Giulia Fanti , Vyas Sekar

Individual-level data (microdata) that characterizes a population, is essential for studying many real-world problems. However, acquiring such data is not straightforward due to cost and privacy constraints, and access is often limited to…

Machine Learning · Computer Science 2022-12-13 Angeela Acharya , Siddhartha Sikdar , Sanmay Das , Huzefa Rangwala

Generative modeling has been used frequently in synthetic data generation. Fairness and privacy are two big concerns for synthetic data. Although Recent GAN [\cite{goodfellow2014generative}] based methods show good results in preserving…

Machine Learning · Computer Science 2023-07-04 Weijie Xu , Jinjin Zhao , Francis Iannacci , Bo Wang

The widespread development and adoption of open-source software have built an ecosystem for open development and collaboration. In this ecosystem, individuals and organizations collaborate to create high-quality software that can be used by…

Digital Libraries · Computer Science 2023-11-28 Xiaoya Xia , Shengyu Zhao , Fanyu Han , Fenglin Bi , Wei Wang

Scientists strive to make their datasets available in open repositories, with the goal that they be findable, accessible, interoperable, and reusable (FAIR). Although it is hard for most investigators to remember all the guiding principles…

Digital Libraries · Computer Science 2025-07-31 Mark A. Musen , Martin J. O'Connor , Josef Hardi , Marcos Martinez-Romero

As a specific category of artificial intelligence (AI), generative artificial intelligence (GenAI) generates new content that resembles what is created by humans. The rapid development of GenAI systems has created a huge amount of new data…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-07-11 Yun-Cheng Wang , Jintang Xue , Chengwei Wei , C. -C. Jay Kuo

The Hybrid Technology Hub and many other research centers work in cross-functional teams whose workflow is not necessarily linear and where in many cases technology advances are done through parallel work. The lack of proper tools and…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-02-18 Pavel Vazquez , Kayoko Shoji , Steffen Novik , Stefan Krauss , Simon Rayner

Since late 2022, generative AI has taken the world by storm, with widespread use of tools including ChatGPT, Gemini, and Claude. Generative AI and large language model (LLM) applications are transforming how individuals find and access data…

Artificial Intelligence · Computer Science 2024-05-08 Hannah Chafetz , Sampriti Saxena , Stefaan G. Verhulst

In open-source software development environments; textual, numerical and relationship-based data generated are of interest to researchers. Various data sets are available for this data, which is frequently used in areas such as software…

Software Engineering · Computer Science 2020-10-01 Abdulkadir Şeker , Banu Diri , Halil Arslan

Over the last several decades, there has been rapid growth in the number and scope of agricultural genetics, genomics and breeding (GGB) databases and resources. The AgBioData Consortium (https://www.agbiodata.org/) currently represents 44…

Generative models such as Large Language Models, Diffusion Models, and generative adversarial networks have recently revolutionized the creation of synthetic data, offering scalable solutions to data scarcity, privacy, and annotation…

Machine Learning · Computer Science 2025-08-28 Dawei Li , Yue Huang , Ming Li , Tianyi Zhou , Xiangliang Zhang , Huan Liu

While recent advances in neural representations and generative models have revolutionized 3D content creation, the field remains constrained by significant data processing bottlenecks. To address this, we introduce HY3D-Bench, an…

Astronomy produces extremely large data sets from ground-based telescopes, space missions, and simulation. The volume and complexity of these rich data sets require new approaches and advanced tools to understand the information contained…

Instrumentation and Methods for Astrophysics · Physics 2014-02-25 Demitri Muna , Eric Huff

BEANS software is a web based, easy to install and maintain, new tool to store and analyse data in a distributed way for a massive amount of data. It provides a clear interface for querying, filtering, aggregating, and plotting data from an…

Instrumentation and Methods for Astrophysics · Physics 2016-03-25 Arkadiusz Hypki

In this report we describe the implementation and approach developed during the GENIUS Project. The GENIUS project is about the generation of usable user interfaces. It tries to cope with issues related to automatic generation where,…

Human-Computer Interaction · Computer Science 2013-10-08 Jean-Sebastien Sottet , Alain Vagner

Despite recent advancements in neural 3D reconstruction, the dependence on dense multi-view captures restricts their broader applicability. Additionally, 3D scene generation is vital for advancing embodied AI and world models, which depend…

Computer Vision and Pattern Recognition · Computer Science 2025-11-19 Yuxin Zhang , Ziyu Lu , Hongbo Duan , Keyu Fan , Pengting Luo , Peiyu Zhuang , Mengyu Yang , Houde Liu

Grid computing is a distributed computing paradigm which aims to aggregate several heterogeneous and distributed resources, belonging to different and independent organizations, in a dynamic, transparent and coordinated way. Since its…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-12-27 Cosimo Anglano , Massimo Canonico , Marco Guazzone