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Despite the growing interest in Explainable Artificial Intelligence (XAI), explainability is rarely considered during hyperparameter tuning or neural architecture optimization, where the focus remains primarily on minimizing predictive…

Machine Learning · Computer Science 2025-05-26 Alexander Hinterleitner , Thomas Bartz-Beielstein

Network alignment (NA) aims to find regions of similarities between molecular networks of different species. There exist two NA categories: local (LNA) or global (GNA). LNA finds small highly conserved network regions and produces a…

Molecular Networks · Quantitative Biology 2015-09-30 Lei Meng , Aaron Striegel , Tijana Milenkovic

Network embedding (or graph embedding) has been widely used in many real-world applications. However, existing methods mainly focus on networks with single-typed nodes/edges and cannot scale well to handle large networks. Many real-world…

Social and Information Networks · Computer Science 2019-05-21 Yukuo Cen , Xu Zou , Jianwei Zhang , Hongxia Yang , Jingren Zhou , Jie Tang

Prediction accuracy and model explainability are the two most important objectives when developing machine learning algorithms to solve real-world problems. The neural networks are known to possess good prediction performance, but lack of…

Machine Learning · Statistics 2019-09-04 Zebin Yang , Aijun Zhang , Agus Sudjianto

High quality explanations of neural networks (NNs) should exhibit two key properties. Completeness ensures that they accurately reflect a network's function and interpretability makes them understandable to humans. Many existing methods…

Machine Learning · Computer Science 2025-03-20 Nolan Dey , Eric Taylor , Alexander Wong , Bryan Tripp , Graham W. Taylor

How can we identify the training examples that contribute most to the prediction of a tree ensemble? In this paper, we introduce TREX, an explanation system that provides instance-attribution explanations for tree ensembles, such as random…

Machine Learning · Computer Science 2021-12-20 Jonathan Brophy , Daniel Lowd

Various AI models are increasingly being considered as part of clinical decision-support tools. However, the trustworthiness of such models is rarely considered. Clinicians are more likely to use a model if they can understand and trust its…

Artificial Intelligence · Computer Science 2020-03-09 Evangelia Kyrimi , Somayyeh Mossadegh , Nigel Tai , William Marsh

Deep learning-based medical image analysis faces a significant barrier due to the lack of interpretability. Conventional explainable AI (XAI) techniques, such as Grad-CAM and SHAP, often highlight regions outside clinical interests. To…

Image and Video Processing · Electrical Eng. & Systems 2025-02-17 Yuhao Zhang , Mingcheng Zhu , Zhiyao Luo

Network embedding represents nodes in a continuous vector space and preserves structure information from the Network. Existing methods usually adopt a "one-size-fits-all" approach when concerning multi-scale structure information, such as…

Machine Learning · Computer Science 2018-03-28 Lei Sang , Min Xu , Shengsheng Qian , Xindong Wu

Conflicting explanations, arising from different attribution methods or model internals, limit the adoption of machine learning models in safety-critical domains. We turn this disagreement into an advantage and introduce EXplanation…

Machine Learning · Computer Science 2025-11-18 Sichao Li , Tommy Liu , Quanling Deng , Amanda S. Barnard

In this report we investigate fundamental requirements for the application of classifier patching on neural networks. Neural network patching is an approach for adapting neural network models to handle concept drift in nonstationary…

Machine Learning · Computer Science 2019-01-17 Sebastian Kauschke , David Hermann Lehmann

Network embeddings, which learn low-dimensional representations for each vertex in a large-scale network, have received considerable attention in recent years. For a wide range of applications, vertices in a network are typically…

Computation and Language · Computer Science 2018-08-30 Dinghan Shen , Xinyuan Zhang , Ricardo Henao , Lawrence Carin

Ensemble Machine Learning (EML) techniques, especially stacking, have been shown to improve predictive performance by combining multiple base models. However, they are often criticized for their lack of interpretability. In this paper, we…

Machine Learning · Computer Science 2025-09-16 Moncef Garouani , Ayah Barhrhouj , Olivier Teste

Transparency and accountability have become major concerns for black-box machine learning (ML) models. Proper explanations for the model behavior increase model transparency and help researchers develop more accountable models. Graph neural…

Machine Learning · Computer Science 2023-05-09 Shichang Zhang , Jiani Zhang , Xiang Song , Soji Adeshina , Da Zheng , Christos Faloutsos , Yizhou Sun

This paper considers a game-theoretic framework for distributed machine learning problems over networks where the information acquisition at a node is modeled as a rational choice of a player. In the proposed game, players decide both the…

Computer Science and Game Theory · Computer Science 2022-10-28 Shutian Liu , Tao Li , Quanyan Zhu

We investigate the explainability of graph neural networks (GNNs) as a step toward elucidating their working mechanisms. While most current methods focus on explaining graph nodes, edges, or features, we argue that, as the inherent…

Machine Learning · Computer Science 2024-01-02 Shurui Gui , Hao Yuan , Jie Wang , Qicheng Lao , Kang Li , Shuiwang Ji

Consider a set of agents who play a network game repeatedly. Agents may not know the network. They may even be unaware that they are interacting with other agents in a network. Possibly, they just understand that their payoffs depend on an…

Theoretical Economics · Economics 2022-07-26 Pierpaolo Battigalli , Fabrizio Panebianco , Paolo Pin

Despite their dominance in vision and language, deep neural networks often underperform relative to tree-based models on tabular data. To bridge this gap, we incorporate five key inductive biases into deep learning: robustness to irrelevant…

Machine Learning · Statistics 2026-03-24 Kry Yik Chau Lui , Cheng Chi , Kishore Basu , Yanshuai Cao

Interpretable brain network models for disease prediction are of great value for the advancement of neuroscience. GNNs are promising to model complicated network data, but they are prone to overfitting and suffer from poor interpretability,…

Machine Learning · Computer Science 2021-07-13 Hejie Cui , Wei Dai , Yanqiao Zhu , Xiaoxiao Li , Lifang He , Carl Yang

Graph neural networks have been used for a variety of learning tasks, such as link prediction, node classification, and node clustering. Among them, link prediction is a relatively under-studied graph learning task, with current…

Machine Learning · Computer Science 2022-08-29 Xinxing Wu , Qiang Cheng
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