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Visual as well as genetic biometrics are routinely employed to identify species and individuals in biological applications. However, no attempts have been made in this domain to computationally enhance visual classification of rare classes…

Computer Vision and Pattern Recognition · Computer Science 2023-09-14 Tayfun Karaderi , Tilo Burghardt , Raphael Morard , Daniela Schmidt

Retrieval-augmented generation (RAG) combines document retrieval with large language models to produce responses grounded in external evidence. While several R packages support core components of RAG workflows, integrated evaluation of RAG…

Computation · Statistics 2026-04-28 Muhammad Aimal Rehman , Zhili Lu , Chi-Kuang Yeh

Despite the strong abilities, large language models (LLMs) still suffer from hallucinations and reliance on outdated knowledge, raising concerns in knowledge-intensive tasks. Graph-based retrieval-augmented generation (GRAG) enriches LLMs…

Computation and Language · Computer Science 2026-01-14 Derong Xu , Pengyue Jia , Xiaopeng Li , Yingyi Zhang , Maolin Wang , Qidong Liu , Xiangyu Zhao , Yichao Wang , Huifeng Guo , Ruiming Tang , Enhong Chen , Tong Xu

Scene Graph Generation (SGG) has achieved significant progress recently. However, most previous works rely heavily on fixed-size entity representations based on bounding box proposals, anchors, or learnable queries. As each representation's…

Computer Vision and Pattern Recognition · Computer Science 2023-09-08 Hengyue Liu , Bir Bhanu

The Tisserand graph (TG) is a graphical tool commonly employed in the preliminary design of gravity-assisted trajectories. The TG is a two-dimensional map showing essential orbital information regarding the Keplerian orbits resulting from…

Earth and Planetary Astrophysics · Physics 2021-04-02 D. de la Torre Sangrà , E. Fantino , R. Flores , O. Calvente Lozano , C. García Estelrich

Graph-based Retrieval-Augmented Generation (Graph-RAG) enhances large language models (LLMs) by structuring retrieval over an external corpus. However, existing approaches typically assume a static corpus, requiring expensive full-graph…

Information Retrieval · Computer Science 2025-07-08 Fangyuan Zhang , Zhengjun Huang , Yingli Zhou , Qintian Guo , Zhixun Li , Wensheng Luo , Di Jiang , Yixiang Fang , Xiaofang Zhou

Networks provide a meaningful way to represent and analyze complex biological information, but the methodological details of network-based tools are often described for a technical audience. Graphery is a hands-on tutorial webserver…

Molecular Networks · Quantitative Biology 2024-02-19 Heyuan Zeng , Jinbiao Zhang , Gabriel A. Preising , Tobias Rubel , Pramesh Singh , Anna Ritz

Recently deep learning has been successfully applied to unsupervised active learning. However, current method attempts to learn a nonlinear transformation via an auto-encoder while ignoring the sample relation, leaving huge room to design…

Machine Learning · Computer Science 2021-11-09 Handong Ma , Changsheng Li , Xinchu Shi , Ye Yuan , Guoren Wang

Retrieval-Augmented Generation (RAG) enhances LLMs by grounding generation in query-relevant external evidence. Beyond unstructured text corpora, Graph RAG integrates knowledge graphs into the retrieval pipeline, enabling LLMs to access…

Cryptography and Security · Computer Science 2026-05-28 Jinze Gu , Qinghua Mao , Xi Lin , Jun Wu

This paper describes a novel Python package, named causalgraph, for modeling and saving causal graphs embedded in knowledge graphs. The package has been designed to provide an interface between causal disciplines such as causal discovery…

Artificial Intelligence · Computer Science 2023-01-23 Sven Pieper , Carl Willy Mehling , Dominik Hirsch , Tobias Lüke , Steffen Ihlenfeldt

Naive Retrieval-Augmented Generation (RAG) focuses on individual documents during retrieval and, as a result, falls short in handling networked documents which are very popular in many applications such as citation graphs, social media, and…

Machine Learning · Computer Science 2025-07-15 Yuntong Hu , Zhihan Lei , Zheng Zhang , Bo Pan , Chen Ling , Liang Zhao

Knowledge graphs (KGs) have become the preferred technology for representing, sharing and adding knowledge to modern AI applications. While KGs have become a mainstream technology, the RDF/SPARQL-centric toolset for operating with them at…

We introduce ProcGen3D, a new approach for 3D content creation by generating procedural graph abstractions of 3D objects, which can then be decoded into rich, complex 3D assets. Inspired by the prevalent use of procedural generators in…

Computer Vision and Pattern Recognition · Computer Science 2025-11-11 Xinyi Zhang , Daoyi Gao , Naiqi Li , Angela Dai

Vision Transformers (ViTs) have revolutionized the field of computer vision, yet their deployments on resource-constrained devices remain challenging due to high computational demands. To expedite pre-trained ViTs, token pruning and token…

Computer Vision and Pattern Recognition · Computer Science 2024-01-09 Xuwei Xu , Sen Wang , Yudong Chen , Yanping Zheng , Zhewei Wei , Jiajun Liu

Visual analytics is arguably the most important step in getting acquainted with your data. This is especially the case for time series, as this data type is hard to describe and cannot be fully understood when using for example summary…

Human-Computer Interaction · Computer Science 2022-07-19 Jonas Van Der Donckt , Jeroen Van Der Donckt , Emiel Deprost , Sofie Van Hoecke

As opposed to natural languages, source code understanding is influenced by grammatical relationships between tokens regardless of their identifier name. Graph representations of source code such as Abstract Syntax Tree (AST) can capture…

Machine Learning · Computer Science 2021-11-18 Junyan Cheng , Iordanis Fostiropoulos , Barry Boehm

Retrieval-augmented generation (RAG) has become a cornerstone for knowledge-intensive tasks. However, the efficacy of RAG is often bottlenecked by the ``one-size-fits-all'' retrieval paradigm, as different queries exhibit distinct…

Information Retrieval · Computer Science 2026-04-28 Tong Zhao , Yutao Zhu , Yucheng Tian , Zhicheng Dou

We consider a novel backward-compatible paradigm of general data analytics over a recently-reported semisimple algebra (called t-algebra). We study the abstract algebraic framework over the t-algebra by representing the elements of…

Computer Vision and Pattern Recognition · Computer Science 2021-05-04 Liang Liao , Stephen John Maybank

Retrieval-augmented generation (RAG) improves the response quality of large language models (LLMs) by retrieving knowledge from external databases. Typical RAG approaches split the text database into chunks, organizing them in a flat…

Computation and Language · Computer Science 2025-11-18 Boyu Chen , Zirui Guo , Zidan Yang , Yuluo Chen , Junze Chen , Zhenghao Liu , Chuan Shi , Cheng Yang

Retrieval-Augmented Generation (RAG) is an advanced technique designed to address the challenges of Artificial Intelligence-Generated Content (AIGC). By integrating context retrieval into content generation, RAG provides reliable and…

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