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Epithelial monolayers are some of the best-studied models for collective cell migration due to their abundance in multicellular systems and their tractability. Experimentally, the collective migration of epithelial monolayers can be…

Quantitative Methods · Quantitative Biology 2024-02-15 Simon F. Martina-Perez , Isaac B. Breinyn , Daniel J. Cohen , Ruth E. Baker

We rigorously derive pressureless Euler-type equations with nonlocal dissipative terms in velocity and aggregation equations with nonlocal velocity fields from Newton-type particle descriptions of swarming models with alignment…

Analysis of PDEs · Mathematics 2021-06-16 José A. Carrillo , Young-Pil Choi

We present simulations of evacuation processes using a recently introduced cellular automaton model for pedestrian dynamics. This model applies a bionics approach to describe the interaction between the pedestrians using ideas from…

Statistical Mechanics · Physics 2015-06-24 Ansgar Kirchner , Andreas Schadschneider

The effect of mechanical interactions between cells in the spreading of bacterial populations was investigated in one-dimensional space. A continuum-mechanics approach, comprising cell migration, proliferation, and exclusion processes, was…

Biological Physics · Physics 2015-12-15 Waipot Ngamsaad , Suthep Suantai

Experience collected in mesoscopic dynamic modeling of externally driven systems indicates absence of potentials that could play role of equilibrium or nonequilibrium thermodynamic potentials yet their thermo-dynamics-like modeling is often…

Statistical Mechanics · Physics 2017-02-01 Miroslav Grmela

The migratory dynamics of cells in physiological processes, ranging from wound healing to cancer metastasis, rely on contact-mediated cell-cell interactions. These interactions play a key role in shaping the stochastic trajectories of…

A two-dimensional mathematical model for cells migrating without adhesion capabilities is presented and analyzed. Cells are represented by their cortex, which is modelled as an elastic curve, subject to an internal pressure force. Net…

Analysis of PDEs · Mathematics 2020-12-14 Gaspard Jankowiak , Diane Peurichard , Anne Reversat , Christian Schmeiser , Michael Sixt

In this paper we consider kinetic and associated macroscopic models for chemotaxis on a network. Coupling conditions at the nodes of the network for the kinetic problem are presented and used to derive coupling conditions for the…

Analysis of PDEs · Mathematics 2015-12-29 Raul Borsche , Axel Klar , Ha T. N. Pham

We propose a 2-dimensional cellular automaton model to simulate pedestrian traffic. It is a vmax=1 model with exclusion statistics and parallel dynamics. Long-range interactions between the pedestrians are mediated by a so called floor…

Statistical Mechanics · Physics 2009-11-07 C. Burstedde , K. Klauck , A. Schadschneider , J. Zittartz

In active matter and living matter, such as clusters of migrating cells, collective dynamics emerges from the underlying interactions. A common assumption of theoretical descriptions of collective cell migration is that these interactions…

Biological Physics · Physics 2026-01-12 Agathe Jouneau , Tom Brandstätter , Bram Hoogland , Joachim O. Rädler , Chase P. Broedersz

The existing state of the art for singular models of flocking is overviewed, starting from microscopic model of Cucker and Smale with singular communication weight, through its mesoscopic mean-filed limit, up to the corresponding…

Analysis of PDEs · Mathematics 2021-02-04 Piotr Minakowski , Piotr B. Mucha , Jan Peszek , Ewelina Zatorska

Constructing physical models of living cells and tissues is an extremely challenging task because of the high complexities of both intra- and intercellular processes. In addition, the force that a single cell generates vanishes in total due…

Soft Condensed Matter · Physics 2019-05-09 Mitsusuke Tarama , Kenji Mori , Ryoichi Yamamoto

We provide a bird's eye view on developments in analyzing the long time, large crowd behavior of Cucker-Smale alignment dynamics. We consider a class of (fully-)discrete models, paying particular attention to general alignment protocols in…

Dynamical Systems · Mathematics 2023-06-06 Eitan Tadmor

Continuum models for the spatial dynamics of growing cell populations have been widely used to investigate the mechanisms underpinning tissue development and tumour invasion. These models consist of nonlinear partial differential equations…

Tissues and Organs · Quantitative Biology 2019-07-15 Mark AJ Chaplain , Tommaso Lorenzi , Fiona R Macfarlane

The article proposes generalizations of the macroscopic model of plasma of scalar charged particles to the cases of inter-particle interaction with multiple scalar fields and negative effective masses of these particles. The model is based…

General Relativity and Quantum Cosmology · Physics 2015-04-15 Yu. G. Ignat'ev

We analyse the one-dimensional pressureless Euler-Poisson equations with a linear damping and non-local interaction forces. These equations are relevant for modelling collective behavior in mathematical biology. We provide a sharp threshold…

Analysis of PDEs · Mathematics 2016-04-19 José A. Carrillo , Young-Pil Choi , Ewelina Zatorska

A rigorous limit procedure is presented which links nonlocal models involving adhesion or nonlocal chemotaxis to their local counterparts featuring haptotaxis and classical chemotaxis, respectively. It relies on a novel reformulation of the…

Analysis of PDEs · Mathematics 2019-11-27 Maria Krasnianski , Kevin Painter , Christina Surulescu , Anna Zhigun

Throughout developmental biology and ecology, transport can be driven by nonlocal interactions. Examples include cells that migrate based on contact with pseudopodia extended from other cells, and animals that move based on their vision of…

Pattern Formation and Solitons · Physics 2023-07-07 Thomas Jun Jewell , Andrew L. Krause , Philip K. Maini , Eamonn A. Gaffney

Cell layers eliminate unwanted cells through the extrusion process, which underlines healthy versus flawed tissue behaviors. Although several biochemical pathways have been identified, the underlying mechanical basis including the forces…

Soft Condensed Matter · Physics 2023-04-20 Siavash Monfared , Guruswami Ravichandran , Jose E. Andrade , Amin Doostmohammadi

Model-free data-driven computational mechanics replaces phenomenological constitutive functions by numerical simulations based on data sets of representative samples in stress-strain space. The distance of strain and stress pairs from the…

Computational Engineering, Finance, and Science · Computer Science 2021-11-29 Kerem Ciftci , Klaus Hackl